Pre_GI Gene

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Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:2131939 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21319392132430492thioesterase superfamily proteinQuickGO ontologyBLASTP
213256821334438766-phosphogluconate dehydrogenase NAD-bindingQuickGO ontologyBLASTP
21335272134417891Cytidine deaminaseQuickGO ontologyBLASTP
213451321359941482Exodeoxyribonuclease IQuickGO ontologyBLASTP
213622021372961077integrase family proteinQuickGO ontologyBLASTP
21373262138135810hypothetical proteinBLASTP
21385302138886357hypothetical proteinBLASTP
21388372139706870restriction endonuclease-like proteinQuickGO ontologyBLASTP
214004621410831038hypothetical proteinBLASTP
21418182142375558Resolvase domainQuickGO ontologyBLASTP
214266721437041038hypothetical proteinBLASTP
214370121454251725UBATHIF-type NADFAD binding proteinQuickGO ontologyBLASTP
21454132145886474hypothetical proteinBLASTP
214589921469691071hypothetical proteinBLASTP
21476402148377738hypothetical protein
21490582149864807rRNA guanine-N1--methyltransferaseQuickGO ontologyBLASTP
21501692150375207cold-shock DNA-binding domain proteinQuickGO ontologyBLASTP
21509822151224243hypothetical protein
21513562152255900ABC transporter relatedQuickGO ontologyBLASTP
21522522153061810ABC-2 type transporterQuickGO ontologyBLASTP
21532012153848648protein of unknown function DUF480QuickGO ontologyBLASTP
21539682154801834hypothetical proteinBLASTP
215543421573471914arginine decarboxylaseQuickGO ontologyBLASTP
21575622158482921Adenosylmethionine decarboxylaseQuickGO ontologyBLASTP