Pre_GI Gene

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Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:1783500 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
178350117862752775polysaccharide export proteinQuickGO ontologyBLASTP
17863801786775396S23 ribosomal proteinQuickGO ontologyBLASTP
17868391787816978lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
178807117892251155dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
17892221790109888glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
17901091790990882dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
17909951791549555dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
179155617930941539polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
179310817941271020glycosyl transferase family 2QuickGO ontologyBLASTP
1794184179554513624Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
179561417967231110hypothetical proteinBLASTP
17967101797609900glycosyl transferase family 2QuickGO ontologyBLASTP
179762717988231197hypothetical proteinBLASTP
179879817999941197glycosyl transferase group 1QuickGO ontologyBLASTP
180005418011091056Protein of unknown function DUF1972QuickGO ontologyBLASTP
180115218022281077undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferaseQuickGO ontologyBLASTP
180239618034421047undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferaseQuickGO ontologyBLASTP
180380718053001494beta-lactamase domain proteinQuickGO ontologyBLASTP
180588518070541170UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
180748018084901011NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
18090651809634570dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
181003018114271398CDP-glycerolpolyglycerophosphate glycerophosphotransferaseQuickGO ontologyBLASTP
18114271811882456glycerol-3-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
181193518133771443nucleotidyl transferaseQuickGO ontologyBLASTP
181338818155562169glycosyl transferase WecBTagACpsF familyQuickGO ontologyBLASTP