Pre_GI Gene

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Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:1561691 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
156169115632081518diguanylate phosphodiesteraseQuickGO ontologyBLASTP
15633281563888561CBS domain containing proteinQuickGO ontologyBLASTP
15641931564915723nitroreductaseQuickGO ontologyBLASTP
15651171565644528PEBP family proteinQuickGO ontologyBLASTP
15656901566499810transcriptional regulator AraC familyQuickGO ontologyBLASTP
15673031567644342alkylphosphonate utilization operon protein PhnAQuickGO ontologyBLASTP
15677181568530813transcriptional regulator AraC familyQuickGO ontologyBLASTP
15686321569165534alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
15691841569621438protein of unknown function DUF417QuickGO ontologyBLASTP
15701821570508327integrase catalytic regionQuickGO ontologyBLASTP
15713471572246900transcriptional regulator LysR familyQuickGO ontologyBLASTP
15732561573825570hypothetical protein
157399715755801584diguanylate cyclasephosphodiesteraseQuickGO ontologyBLASTP
15757021576013312Peroxiredoxin-like proteinQuickGO ontologyBLASTP
157610215777421641methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
157788615808552970MSHA biogenesis protein MshQQuickGO ontologyBLASTP
15808741581065192hypothetical proteinBLASTP
158116715823571191hypothetical proteinBLASTP
15839791584164186phage integrase family proteinQuickGO ontologyBLASTP
158453215857791248ATP-dependent endonuclease of the OLD family-like proteinQuickGO ontologyBLASTP
15857721586353582hypothetical proteinBLASTP
15864521586625174phage integrase family proteinQuickGO ontologyBLASTP
15872161587716501hypothetical proteinBLASTP
158777015887951026integrase family proteinQuickGO ontologyBLASTP
158879615899861191hypothetical proteinBLASTP
15900061590695690CI repressorQuickGO ontologyBLASTP