Pre_GI Gene

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Host: NC_009997 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009997:2699644 Shewanella baltica OS195, complete genome

Host Lineage: Shewanella baltica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the Baltic Sea. A psychrophilic bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species is differentiated from other Shewanella spp. based on its ability to grow at 4 degrees C but not at 37, production of N-acetyl-beta-glucosaminidase, lack of chymotrypsin, and ability to use a variety of complex carbon compounds as carbon and energy sources.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26992502699651402hypothetical protein
26996442700090447hypothetical protein
27000952701015921hypothetical protein
27011352701785651Yop virulence translocation RQuickGO ontologyBLASTP
27017822702051270type III secretion protein HrpO familyQuickGO ontologyBLASTP
27020542702854801type III secretion protein SpaRYscTHrcTQuickGO ontologyBLASTP
270287627039251050type III secretion protein YscUHrpY familyQuickGO ontologyBLASTP
27047452705557813Integrase catalytic regionQuickGO ontologyBLASTP
27056112705922312transposase IS3IS911 family proteinQuickGO ontologyBLASTP
27060122706782771DNA-directed DNA polymeraseQuickGO ontologyBLASTP
27068662707183318hypothetical proteinBLASTP
27076932708475783hypothetical proteinBLASTP
27093392710094756hypothetical proteinBLASTP
27102422710751510hypothetical proteinBLASTP
27116332711818186hypothetical proteinBLASTP
27119972712329333Helix-destabilizing proteinQuickGO ontologyBLASTP
271233527134531119replication protein gene IIXQuickGO ontologyBLASTP
27136012713984384transcriptional regulator XRE familyQuickGO ontologyBLASTP
27150882715273186hypothetical proteinBLASTP
27154522715784333Helix-destabilizing proteinQuickGO ontologyBLASTP
271579027169081119replication protein gene IIXQuickGO ontologyBLASTP
27170562717439384transcriptional regulator XRE familyQuickGO ontologyBLASTP
27185432718728186hypothetical proteinBLASTP
27189072719239333Helix-destabilizing proteinQuickGO ontologyBLASTP
271924527203631119replication protein gene IIXQuickGO ontologyBLASTP
27205112720894384transcriptional regulator XRE familyQuickGO ontologyBLASTP
27219982722183186hypothetical proteinBLASTP