Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:4337617 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
43376174338342726two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
433836443396741311integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
433982543417831959methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
43418884342733846hypothetical protein
43428624343398537Redoxin domain proteinQuickGO ontologyBLASTP
43434684344013546hypothetical proteinBLASTP
43440404344258219hypothetical proteinBLASTP
43447524345375624hypothetical protein
43453884345882495hypothetical protein
43483504348700351hypothetical protein
43488744349653780protein of unknown function DUF548QuickGO ontologyBLASTP
43498164350655840protein of unknown function DUF519QuickGO ontologyBLASTP
43506844351046363hypothetical proteinBLASTP
43510524351783732Lytic transglycosylase catalyticQuickGO ontologyBLASTP
435178343527931011hypothetical proteinBLASTP
43528104353379570LemA family proteinQuickGO ontologyBLASTP
43534914353730240hypothetical protein
435425543558681614AbgT putative transporterQuickGO ontologyBLASTP
43559554356827873transcriptional regulator LysR familyQuickGO ontologyBLASTP
43569214357424504Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
435751043595492040Oligopeptidase AQuickGO ontologyBLASTP
43598764360652777hypothetical proteinBLASTP
43607734361315543hypothetical proteinBLASTP
436144743628021356glutathione-disulfide reductaseQuickGO ontologyBLASTP
43630414363409369hypothetical protein
43639544364625672hypothetical proteinBLASTP
43647424365734993hypothetical protein
43664864367391906alpha-L-glutamate ligases RimK familyQuickGO ontologyBLASTP
436739243684141023Succinylglutamate desuccinylaseaspartoacylaseQuickGO ontologyBLASTP
43684454368870426protein of unknown function DUF785QuickGO ontologyBLASTP
436899443703641371MgtE integral membrane regionQuickGO ontologyBLASTP
43705274371483957conserved hypothetical protein 698QuickGO ontologyBLASTP
43717454372470726ThiJPfpI domain proteinQuickGO ontologyBLASTP
437260043738051206metal dependent phosphohydrolaseQuickGO ontologyBLASTP