Pre_GI Gene

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Host: NC_008782 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008782:2568027 Acidovorax sp. JS42, complete genome

Host Lineage: Acidovorax; Acidovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Acidovorax sp. JS42, formerly Pseudomonas sp. JS42, was isolated from nitrobenzene-contaminated sediment and is capable of using 2-nitrotolulene as a sole carbon and energy source. 2-nitrotolulene, a nitroaromatic compound, is used in the manufacture of dyes, pigments and explosives. Nitroaromatic compounds, which contain an aromatic ring with one or more nitro groups attached, are a significant contaminant in industrial soils. Acidovorax sp. JS42 degrades 2-nitrotolulene by first removing the nitro moiety producing 3-methylcatechol. The enzyme involved in this process, 2-nitrotolulene dioxygenase, has been purified and characterized.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
256802725716023576delta-1-pyrroline-5-carboxylate dehydrogenaseQuickGO ontologyBLASTP
2571668257227360625 RNA ligaseQuickGO ontology
257268825734707834Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
257348825745341047Polysulphide reductase NrfDQuickGO ontologyBLASTP
257463525778293195molydopterin dinucleotide-binding regionQuickGO ontologyBLASTP
25783822579275894hypothetical proteinBLASTP
257927225818422571DEADDEAH box helicase domain proteinQuickGO ontologyBLASTP
25818352582134300hypothetical proteinBLASTP
258263525852022568helicase c2QuickGO ontologyBLASTP
258519925868841686hypothetical proteinBLASTP
258695025879511002hypothetical proteinBLASTP
25880902588767678two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
258876425902241461integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
25902322591065834Redoxin domain proteinQuickGO ontologyBLASTP
25911042592006903beta-lactamase domain proteinQuickGO ontologyBLASTP
25921142592437324regulatory protein ArsRQuickGO ontologyBLASTP
25924422592885444protein of unknown function DUF395 YeeEYedEQuickGO ontologyBLASTP
25929082593330423protein of unknown function DUF395 YeeEYedEQuickGO ontologyBLASTP
25934282594051624protein of unknown function DUF599QuickGO ontology
25940562594703648hypothetical protein
25949592595657699FMN-binding negative transcriptional regulatorQuickGO ontologyBLASTP
25958292596410582transcriptional regulator TetR familyQuickGO ontologyBLASTP
259651725978451329beta-ketoacyl synthaseQuickGO ontologyBLASTP
259793925995341596Integrase catalytic regionQuickGO ontologyBLASTP
25995312600295765IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
26002492600689441hypothetical proteinBLASTP
26008292601488660hypothetical proteinBLASTP
260148126025721092hypothetical proteinBLASTP
260265726036851029hypothetical proteinBLASTP
26038152604804990hypothetical proteinBLASTP
26048232605200378hypothetical protein
260566526069751311hypothetical proteinBLASTP
260703426081371104hypothetical proteinBLASTP
260814326093721230helix-turn-helix domain proteinQuickGO ontologyBLASTP
26093692609674306hypothetical protein
260986326113771515transposase IS66QuickGO ontologyBLASTP
26114582611769312IS66 Orf2 family proteinQuickGO ontologyBLASTP
26117902612242453transposase IS3IS911 family proteinQuickGO ontologyBLASTP
261288926146491761UvrDREP helicaseQuickGO ontologyBLASTP
261464626164661821hypothetical proteinBLASTP
261669326179341242phage integrase family proteinQuickGO ontologyBLASTP
26185312619208678phosphoglycolate phosphataseQuickGO ontologyBLASTP
26192052619918714ubiquinone biosynthesis O-methyltransferaseQuickGO ontologyBLASTP
26199982620654657OmpAMotB domain proteinQuickGO ontologyBLASTP
262084826235142667DNA gyrase A subunitQuickGO ontologyBLASTP