Pre_GI Gene

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Host: NC_008700 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008700:2701500 Shewanella amazonensis SB2B, complete genome

Host Lineage: Shewanella amazonensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from shallow marine deposits (coastal shelf mud) of the Amazon River delta off of the coast of Brazil. Iron-reducing bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella amazonensis is capable of anaerobically reducing iron, manganese, and sulfur compounds and may be important to the cycling of these compounds in the environment.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27015492702079531dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
27020672702303237conserved hypothetical protein
27023692703274906dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
27037452704662918glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
27046672705032366conserved hypothetical proteinBLASTP
270508627062191134dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
270673427080921359phosphoglucosamine mutaseQuickGO ontologyBLASTP
270820327101371935polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
27101892710767579pilin glycosylation proteinQuickGO ontologyBLASTP
27107772711610834Methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
27116242712190567capsular polysaccharide synthesis proteinQuickGO ontologyBLASTP
27121972712874678conserved hypothetical protein possibly membrane-associatedQuickGO ontologyBLASTP
27128842713807924conserved hypothetical proteinBLASTP
27138042714535732acetoacetyl-CoA reductaseQuickGO ontologyBLASTP
27145322715392861UDP-3-O-3-hydroxymyristoyl-like proteinQuickGO ontologyBLASTP
27153932716022630conserved hypothetical proteinBLASTP
271601927171791161hypothetical proteinBLASTP
271716927183711203hypothetical protein
271836427195631200hypothetical protein
271955627205961041hypothetical proteinBLASTP
272059827216711074DegTDnrJEryC1StrS family proteinQuickGO ontologyBLASTP
27216812722262582putative acetyltransferaseQuickGO ontologyBLASTP
27222662723222957MviM proteinQuickGO ontologyBLASTP
272323527245121278UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
272452927256501122UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
27258392726822984chain length determinant proteinQuickGO ontologyBLASTP
27269642727350387S23 ribosomalQuickGO ontologyBLASTP
272759227300752484ClpX ATPase regulatory subunitQuickGO ontologyBLASTP
27306932731196504transcriptional activator rfaH putativeQuickGO ontologyBLASTP
273162227330941473amino acidpeptide transporterQuickGO ontologyBLASTP
273343027345331104response regulator receiver proteinQuickGO ontologyBLASTP
27346032735433831vacJ lipoprotein putativeQuickGO ontologyBLASTP
273566027375161857hypothetical proteinBLASTP
27375192737821303FlhB domain proteinQuickGO ontologyBLASTP
27379322738336405conserved hypothetical proteinBLASTP
27384062738900495purine-binding chemotaxis protein CheWQuickGO ontologyBLASTP