Pre_GI Gene

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Host: NC_008596 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008596:4196194 Mycobacterium smegmatis str. MC2 155, complete genome

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
419619441970848913-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
419710441978687652-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
419786541990881224acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
419908541998737893-hydroxybutyryl-CoA dehydrataseQuickGO ontologyBLASTP
419987042010991230CAIBBAIF family proteinQuickGO ontologyBLASTP
42013594202099741GntR-family protein transcriptional regulatorQuickGO ontologyBLASTP
420224842036091362major facilitator family protein transporterQuickGO ontologyBLASTP
420397142048709003-hydroxyisobutyrate dehydrogenaseQuickGO ontologyBLASTP
420497242061591188hypothetical proteinBLASTP
42062114206993783oxidoreductase short chain dehydrogenasereductase family proteinQuickGO ontologyBLASTP
42072064207916711hydrolase isochorismatase family proteinQuickGO ontologyBLASTP
420813942095421404TnpC proteinQuickGO ontologyBLASTP
42095784210414837hypothetical proteinBLASTP
42105134211103591hypothetical proteinBLASTP
42111464211262117hypothetical protein
42112594212110852polysaccharide deacetylase family proteinQuickGO ontologyBLASTP
42124044212793390putative transposaseQuickGO ontologyBLASTP
421279342138061014transposaseQuickGO ontologyBLASTP
42155694216120552possible lysine decarboxylase superfamily proteinQuickGO ontologyBLASTP
42161584216742585dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
42167424216960219hypothetical protein
42173514218319969aliphatic nitrilaseQuickGO ontologyBLASTP