Pre_GI Gene

Some Help

Host: NC_008596 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008596:4104476 Mycobacterium smegmatis str. MC2 155, complete genome

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41044764105129654TetR-family protein transcriptional regulatorQuickGO ontologyBLASTP
41052074106040834NAD dependent epimerasedehydratase family proteinQuickGO ontologyBLASTP
41061134106928816citrate synthaseQuickGO ontologyBLASTP
410691841084651548crotonobetainecarnitine-CoA ligaseQuickGO ontologyBLASTP
41085224108932411hypothetical protein
410948941109821494vanillin dehydrogenaseQuickGO ontologyBLASTP
411099641121351140aryl-alcohol dehydrogenaseQuickGO ontologyBLASTP
41121884112853666nitroreductaseQuickGO ontologyBLASTP
41130634113947885hydroxyquinol 12-dioxygenaseQuickGO ontologyBLASTP
41141064114864759transcriptional regulator GntR family proteinQuickGO ontologyBLASTP
41148874115840954amidohydrolase 2QuickGO ontologyBLASTP
411590641176931788GAF domain proteinQuickGO ontologyBLASTP
41177384118019282muconolactone delta-isomeraseQuickGO ontologyBLASTP
411801641191761161L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
41191764120141966dihydropteroate synthaseQuickGO ontologyBLASTP
41202394121222984cyclaseQuickGO ontologyBLASTP
412126541227131449sugar transporter permease proteinQuickGO ontologyBLASTP
41227734123459687hypothetical protein
41236044123735132hypothetical protein
41237324123893162hypothetical protein
412410941268412733transcriptional regulatory proteinQuickGO ontologyBLASTP
41268504126984135hypothetical protein
41272534128044792short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
41281184128876759conserved secreted proteinQuickGO ontologyBLASTP
41293024129928627transcriptional regulator GntR family proteinQuickGO ontologyBLASTP
412999641313151320major facilitator superfamily proteinQuickGO ontologyBLASTP
41313754132064690haloacid dehalogenase type IIQuickGO ontologyBLASTP
41333294133757429translation initiation inhibitorQuickGO ontologyBLASTP
413379041350401251glutamyl-tRNAGln amidotransferase subunit AQuickGO ontologyBLASTP
41353284136236909amidohydrolase family proteinQuickGO ontologyBLASTP
413673441377351002zinc-binding alcohol dehydrogenaseQuickGO ontologyBLASTP
413826941398311563feruloyl-CoA synthetaseQuickGO ontologyBLASTP