Pre_GI Gene

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Host: NC_008596 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008596:4043213 Mycobacterium smegmatis str. MC2 155, complete genome

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
404321340448051593regulatory protein putativeQuickGO ontologyBLASTP
40451464045796651DNA-binding proteinQuickGO ontologyBLASTP
40459984046852855hypothetical proteinBLASTP
404693640480781143beta-lactamaseQuickGO ontologyBLASTP
40490254049669645transcriptional regulator GntR family proteinQuickGO ontologyBLASTP
404973540509161182L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
405091340520461134acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
405359940548101212Transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
405502340563541332integral membrane transport proteinQuickGO ontologyBLASTP
405640140580321632acetyl-coenzyme A synthetaseQuickGO ontologyBLASTP
405808740594601374FAD dependent oxidoreductaseQuickGO ontologyBLASTP
405948040604811002transcriptional regulator AsnC family proteinQuickGO ontologyBLASTP
406059040618191230peptidase M20D amidohydrolaseQuickGO ontologyBLASTP
406181940630961278putative transporterQuickGO ontologyBLASTP
40630934063911819cyclaseQuickGO ontologyBLASTP
406391840652941377integral membrane transport proteinQuickGO ontologyBLASTP
40654474066229783AspGlu racemaseQuickGO ontologyBLASTP
40662194067007789short chain dehydrogenaseQuickGO ontologyBLASTP
406706440683801317N-carbamoyl-L-amino acid amidohydrolaseQuickGO ontologyBLASTP
406842540698881464dihydropyrimidinaseQuickGO ontologyBLASTP
407010340711971095regulatory proteinQuickGO ontologyBLASTP
40714334072320888MmsAB operon regulatory proteinQuickGO ontologyBLASTP
40725584073547990ABC transporter periplasmic-binding protein YphFQuickGO ontologyBLASTP
407360840751191512hypothetical ABC transporter ATP-binding protein YphEQuickGO ontologyBLASTP
407514240761461005ribose transport system permease protein RbsCQuickGO ontologyBLASTP
407619140772731083oxidoreductase zinc-binding dehydrogenase family proteinQuickGO ontologyBLASTP
40772704078223954hypothetical proteinBLASTP
407822040789697503-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
40789664079841876calcium-binding proteinQuickGO ontologyBLASTP
407990440813821479transcriptional regulator CdaR putativeQuickGO ontologyBLASTP