Pre_GI Gene

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Host: NC_008530 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008530:1551356 Lactobacillus gasseri ATCC 33323, complete genome

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
155135615539652610Iron-binding alcohol dehydrogenase and aldehyde dehydrogenase family enzymeQuickGO ontologyBLASTP
15547781555644867BLASTP
1555766155583873tRNA-AsnQuickGO ontology
155585115559691195S ribosomal RNAQuickGO ontologyBLASTP
15559701558600263123S ribosomal RNAQuickGO ontologyBLASTP
15591531560731157916S ribosomal RNAQuickGO ontologyBLASTP
1561127156121690tRNA-SerQuickGO ontologyBLASTP
1561219156129274tRNA-IleQuickGO ontology
1561302156137574tRNA-GlyQuickGO ontology
1561393156146573tRNA-PheQuickGO ontologyBLASTP
1561470156154273tRNA-AspQuickGO ontology
1561546156161974tRNA-MetQuickGO ontology
1561651156172474tRNA-MetQuickGO ontologyBLASTP
1561738156181174tRNA-MetQuickGO ontology
1561840156191374tRNA-ProQuickGO ontology
1561919156199274tRNA-ArgQuickGO ontologyBLASTP
1562002156208786tRNA-LeuQuickGO ontologyBLASTP
1562100156217172tRNA-GlyQuickGO ontology
1562191156226373tRNA-ThrQuickGO ontologyBLASTP
1562265156234985tRNA-LeuQuickGO ontologyBLASTP
1562369156244173tRNA-LysQuickGO ontologyBLASTP
1562444156251673tRNA-ValQuickGO ontologyBLASTP
156252115626391195S ribosomal RNAQuickGO ontologyBLASTP
15626401565270263123S ribosomal RNAQuickGO ontologyBLASTP
15658231567401157916S ribosomal RNAQuickGO ontologyBLASTP
156791815699872070Phosphoglycerol transferase related protein alkaline phosphatase superfamilyQuickGO ontologyBLASTP
157007215710881017Predicted integral membrane proteinQuickGO ontologyBLASTP
157108815721311044GlycosyltransferaseQuickGO ontologyBLASTP
157212415733051182GlycosyltransferaseQuickGO ontologyBLASTP
1573405157348884tRNA-LeuQuickGO ontologyBLASTP
1573520157359071tRNA-CysQuickGO ontologyBLASTP
1573611157368272tRNA-GlnQuickGO ontology
1573687157376276tRNA-HisQuickGO ontologyBLASTP
1573777157384771tRNA-TrpQuickGO ontology
1573855157393682tRNA-TyrQuickGO ontologyBLASTP
1573941157401373tRNA-PheQuickGO ontologyBLASTP
1574018157409073tRNA-AspQuickGO ontology
1574094157416774tRNA-MetQuickGO ontology
1574175157426591tRNA-SerQuickGO ontologyBLASTP
1574291157436272tRNA-GluQuickGO ontologyBLASTP
15745871574949363hypothetical proteinBLASTP
1575301157539090tRNA-SerQuickGO ontologyBLASTP
1575393157546674tRNA-IleQuickGO ontology
1575476157554974tRNA-GlyQuickGO ontology
1575567157563973tRNA-PheQuickGO ontologyBLASTP
1575644157571673tRNA-AspQuickGO ontology
1575720157579374tRNA-MetQuickGO ontology
1575825157589874tRNA-MetQuickGO ontologyBLASTP
1575912157598574tRNA-MetQuickGO ontology
1576014157608774tRNA-ProQuickGO ontology
1576093157616674tRNA-ArgQuickGO ontologyBLASTP
1576176157626186tRNA-LeuQuickGO ontologyBLASTP
1576274157634572tRNA-GlyQuickGO ontology
1576365157643773tRNA-ThrQuickGO ontologyBLASTP
1576439157652385tRNA-LeuQuickGO ontologyBLASTP
1576543157661573tRNA-LysQuickGO ontologyBLASTP
1576618157669073tRNA-ValQuickGO ontologyBLASTP
157669515768131195S ribosomal RNAQuickGO ontologyBLASTP
15768141579444263123S ribosomal RNAQuickGO ontologyBLASTP
15799971581575157916S ribosomal RNAQuickGO ontologyBLASTP
158206415833741311Seryl-tRNA synthetaseQuickGO ontologyBLASTP
15835871584168582Acetyltransferase including N-acetylase of ribosomal proteinQuickGO ontologyBLASTP
15841411584740600hypothetical proteinBLASTP
15849061585694789EsteraselipaseQuickGO ontologyBLASTP
15856991586542844BLASTP
158662615880171392NAD-dependent aldehyde dehydrogenaseQuickGO ontologyBLASTP