Pre_GI Gene

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Host: NC_008392 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008392:666000 Burkholderia cepacia AMMD chromosome 3, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
666150667091942dihydrodipicolinate synthetaseQuickGO ontologyBLASTP
6676836690621380major facilitator superfamily MFS_1QuickGO ontologyBLASTP
669413670042630transcriptional regulator TetR familyQuickGO ontologyBLASTP
6704146715441131alphabeta hydrolase foldQuickGO ontologyBLASTP
672108673040933transcriptional regulator LysR familyQuickGO ontologyBLASTP
673265674131867NmrA family proteinQuickGO ontologyBLASTP
674225675028804hypothetical protein
675067675756690hypothetical proteinBLASTP
676025676495471Glycosyl hydrolase family 32 C-terminal domain proteinQuickGO ontologyBLASTP
6768166784111596LevansucraseQuickGO ontologyBLASTP
678793679068276hypothetical proteinBLASTP
679727680554828short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
680654681031378transcriptional regulator MerR familyQuickGO ontologyBLASTP
681288681968681transcriptional regulator GntR familyQuickGO ontologyBLASTP
682091682426336hypothetical proteinBLASTP
682457682756300hypothetical protein
683207684193987TRAP dicarboxylate transporter DctP subunitQuickGO ontologyBLASTP
684190684768579Tripartite ATP-independent periplasmic transporter DctQ componentQuickGO ontologyBLASTP
6847736861251353TRAP dicarboxylate transporter DctM subunitQuickGO ontologyBLASTP
6862106873011092hypothetical proteinBLASTP
6873866889451560methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP