Pre_GI Gene

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Host: NC_008392 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008392:1029134 Burkholderia cepacia AMMD chromosome 3, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
102913410306091476AmidaseQuickGO ontologyBLASTP
103062510318541230major facilitator superfamily MFS_1QuickGO ontologyBLASTP
10318771032815939hypothetical proteinBLASTP
103289410339191026transcriptional regulator AraC familyQuickGO ontologyBLASTP
10342101034986777transcriptional regulator AraC familyQuickGO ontologyBLASTP
103532810364521125branched-chain amino acid aminotransferaseQuickGO ontologyBLASTP
103669310381741482Aldehyde dehydrogenase NADQuickGO ontologyBLASTP
10383781038914537hypothetical proteinBLASTP
10389281039497570thiamine pyrophosphate enzyme domain protein TPP-bindingQuickGO ontologyBLASTP
103966110413701710glucose-methanol-choline oxidoreductaseQuickGO ontologyBLASTP
10413181042202885HpcHHpaI aldolaseQuickGO ontologyBLASTP
10422221042638417hypothetical proteinBLASTP
104266010439161257Formyl-CoA transferaseQuickGO ontologyBLASTP
10440401044942903transcriptional regulator LysR familyQuickGO ontologyBLASTP
10450751045968894transcriptional regulator LysR familyQuickGO ontologyBLASTP
104621010473611152major facilitator superfamily MFS_1QuickGO ontologyBLASTP
104736710482638972-dehydropantoate 2-reductaseQuickGO ontologyBLASTP
104858110502451665major facilitator superfamily MFS_1QuickGO ontologyBLASTP
10503851051089705haloacid dehalogenase type IIQuickGO ontologyBLASTP
10512921052236945transcriptional regulator LysR familyQuickGO ontologyBLASTP
105256910537951227Diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP
10540321054493462Endoribonuclease L-PSPQuickGO ontologyBLASTP
105461110559301320sodiumdicarboxylate symporterQuickGO ontologyBLASTP
10560291056934906transcriptional regulator LysR familyQuickGO ontologyBLASTP
10570961057800705aspartate racemaseQuickGO ontologyBLASTP
10588331059159327hypothetical proteinBLASTP
10595031060246744short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
10602691060562294protein of unknown function DUF1330QuickGO ontologyBLASTP
10606091061454846aminotransferase class IVQuickGO ontologyBLASTP
10616001062565966transcriptional regulator LysR familyQuickGO ontologyBLASTP
106282410663303507pyruvate ferredoxinflavodoxin oxidoreductaseQuickGO ontologyBLASTP
10664801066944465transcriptional regulator AsnC familyQuickGO ontologyBLASTP
106719310684491257Cystathionine gamma-synthaseQuickGO ontologyBLASTP
106850810698571350glutathione-disulfide reductaseQuickGO ontologyBLASTP
10698541070681828protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
10708181071735918cysteine synthase AQuickGO ontologyBLASTP
107178610728171032Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
10729771073729753short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
107377010749961227OsmC family proteinQuickGO ontologyBLASTP
107500710761701164amine oxidaseQuickGO ontologyBLASTP
10761731076907735anti-ECFsigma factor ChrRQuickGO ontologyBLASTP
10769191077263345alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
10773241077605282hypothetical proteinBLASTP
10776701078443774short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
10787511079680930transcriptional regulator LysR familyQuickGO ontologyBLASTP
10797531080370618transcriptional regulator TetR familyQuickGO ontologyBLASTP
10804401081327888peptidase S15QuickGO ontologyBLASTP
10813451082172828short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP