Pre_GI Gene

Some Help

Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:874015 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
87401587598519715-phosphoryl-5-aminoimidazole 4-amino-5-hydroxymethyl-2-methylpyrimidine-PQuickGO ontologyBLASTP
8761188777791662hypothetical protein putative TIR TollInterleukin receptor and RNA binding domainsQuickGO ontologyBLASTP
877963878163201hypothetical protein
87823587830773tRNA-ArgQuickGO ontology
878368878562195hypothetical protein
879052879459408hypothetical protein putative lambda repressor-like DNA-binding domainQuickGO ontologyBLASTP
879724879948225hypothetical protein
879945880136192hypothetical protein
880147880569423hypothetical proteinBLASTP
880602880748147hypothetical protein putative signal peptideQuickGO ontology
8813928825341143Putative P-loop ATPaseQuickGO ontologyBLASTP
882524883111588putative guanylate kinaseQuickGO ontologyBLASTP
883093883851759hypothetical protein putative Aldolase domainQuickGO ontology
8839908850211032conserved hypothetical protein putative Subtilisin-like domainQuickGO ontologyBLASTP
88492688499166hypothetical protein
885037885255219hypothetical protein
88577888584063hypothetical protein
885979886242264hypothetical protein
8862118873771167putative ATPaseQuickGO ontologyBLASTP
88625288634190hypothetical protein
88650888659790hypothetical protein
88703988712890hypothetical protein
887866887970105hypothetical protein putative signal peptideQuickGO ontology
888053888376324hypothetical protein
888614889249636putative two-component system response regulatorQuickGO ontologyBLASTP
8893908911681779Putative two-component system sensor kinaseQuickGO ontologyBLASTP
8914428924761035hypothetical protein putative signal peptide putative Twin-arginine translocation pathway domainQuickGO ontology
892623893171549hypothetical proteinBLASTP
893181893570390hypothetical protein
894025894297273hypothetical proteinBLASTP
894283894549267hypothetical proteinBLASTP
895143895352210hypothetical protein
895530895895366putative anti-sigma factorQuickGO ontologyBLASTP
896021896683663hypothetical proteinBLASTP
896832897119288hypothetical protein putative signal peptideQuickGO ontology
897438897902465universal stress proteinQuickGO ontology
8979408994451506Putative transmembrane efflux proteinQuickGO ontology
9001839012291047conserved hypothetical protein putative Galactose-binding domainQuickGO ontology