Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:2972323 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29723232973168846Putative CrPFnr-family transcriptional regulatorQuickGO ontologyBLASTP
29732792973935657hypothetical protein
29739322974711780hypothetical protein
29748962975390495hypothetical protein putative Winged helix DNA-binding domainQuickGO ontology
29753902975566177Putative sodiumproton antiporter partialQuickGO ontology
29755562976176621Imidazoleglycerol-phosphate dehydratase IGPD hisB-likeQuickGO ontologyBLASTP
29762192976431213hypothetical protein
29764562976746291hypothetical protein
29769142977627714hypothetical protein putative Thioredoxin type domainQuickGO ontologyBLASTP
29776652978510846hypothetical protein putative DNase I-like domainQuickGO ontology
29785362979369834hypothetical protein
29794082979629222hypothetical protein
297983229810431212hypothetical proteinBLASTP
29812802981651372hypothetical protein
29818792982181303Putative transcriptional regulatorQuickGO ontologyBLASTP
298220229838091608hypothetical proteinBLASTP
29838672984580714hypothetical proteinBLASTP
29845772985575999Mycobacteriophage GP2 proteinQuickGO ontologyBLASTP
29855722985955384hypothetical protein
298595229863443936-pyruvoyl tetrahydrobiopterin synthaseQuickGO ontologyBLASTP
29864282987093666Mycobacteriophage protein Gp5QuickGO ontologyBLASTP
29870992987665567putative GTP cyclohydrolase I Mycobacteriophage protein Gp6QuickGO ontologyBLASTP
29876992988469771hypothetical proteinBLASTP
29884802989313834hypothetical protein
29893372990191855hypothetical protein
29903402990744405Mycobacteriophage protein Gp1 partialQuickGO ontology
29907592991631873hypothetical protein
29917322992415684hypothetical protein putative coiled-coil domainQuickGO ontology
299244429935261083hypothetical protein putative coiled-coil domainQuickGO ontologyBLASTP
29937182994155438hypothetical protein putative alpha-Amylase domainQuickGO ontologyBLASTP
29943062994749444hypothetical proteinBLASTP
29948432995298456hypothetical protein
29953462995621276hypothetical protein
29957412995935195hypothetical protein
29960642996291228hypothetical protein
29963962996662267hypothetical protein
29967292997250522hypothetical protein putative coiled-coil domainQuickGO ontologyBLASTP
29972472997750504hypothetical proteinBLASTP
29979742998507534hypothetical protein putative Lycopene beta-cyclase domainQuickGO ontology
29986472999075429hypothetical protein
29991442999587444hypothetical protein
29997013000021321hypothetical protein
30000183000989972hypothetical proteinBLASTP
30009863001939954hypothetical protein
30019363002316381hypothetical protein
30024433002676234hypothetical protein
30027473002953207Putative site-specific integrase-resolvaseQuickGO ontologyBLASTP
30032573003643387hypothetical protein
30036403003939300hypothetical protein putative Winged helix DNA-binding domainQuickGO ontology
30039663004337372hypothetical protein
30044453004861417putative DNA-binding protein putative lambda repressor-like DNA-binding domainQuickGO ontology
300501230060281017hypothetical protein putative Winged helix DNA-binding domainQuickGO ontology
30063613007056696hypothetical protein putative tubulin domainQuickGO ontology
30072133007404192hypothetical protein
30074483007765318Putative WhiB-family transcriptional regulator putative role in cell cycle controlQuickGO ontology
30078943008115222hypothetical protein
30082083008429222hypothetical protein putative signal peptideQuickGO ontology
30085073008824318hypothetical protein
30090423009992951hypothetical protein putative DNA-binding domainQuickGO ontology
300998930112031215hypothetical protein putative DNA repair domainQuickGO ontology
30112603011484225Putative transcriptional regulatorQuickGO ontology
30117193012303585hypothetical protein
30124033012780378hypothetical protein
30128543013108255hypothetical protein
30132423013541300hypothetical protein
301352630148901365hypothetical proteinBLASTP
301502530161731149Butyryl-CoA dehydrogenaseQuickGO ontologyBLASTP