Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:2732890 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
273289027340201131putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
273402627352311206Putative Acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
273527027364211152putative beta-ketoadipyl CoA thiolase with thiolase-like domainQuickGO ontologyBLASTP
27365442736960417hypothetical protein
27369532737228276hypothetical protein
27372232738155933hypothetical proteinBLASTP
273809827391681071Putative monooxygenaseQuickGO ontologyBLASTP
27392952740122828Putative short-chain dehydrogenaseQuickGO ontologyBLASTP
27401232740398276hypothetical protein
27404492741114666hypothetical proteinBLASTP
27412562742098843putative N5N10-methylenetetrahydromethanopterin reductase-related proteinQuickGO ontologyBLASTP
27422602742658399hypothetical proteinBLASTP
274265127438201170hypothetical proteinBLASTP
27438992744792894Putative short-chain dehydrogenaseQuickGO ontologyBLASTP
274482127460021182Putative ribose transport system permease protein putative membrane proteinQuickGO ontologyBLASTP
274599927475431545Putative ATP-binding protein of sugar ABC transporterQuickGO ontologyBLASTP
27475432748472930hypothetical protein
274871927500321314Putative transposaseQuickGO ontologyBLASTP
27490522749252201Putative transposaseQuickGO ontologyBLASTP
27507212751170450hypothetical proteinBLASTP
27510402751150111hypothetical protein putative transposase partialQuickGO ontology
27512782751520243hypothetical protein
27515292751660132hypothetical protein
275231727554123096putative regulatory protein AfsR-like proteinQuickGO ontologyBLASTP
27554592755761303hypothetical protein
275586427572311368hypothetical proteinBLASTP
27572282757920693Putative antibiotic biosynthesis protein partial matchQuickGO ontologyBLASTP
27580262758673648hypothetical proteinBLASTP
275877927601491371Crotonyl-CoA reductaseQuickGO ontologyBLASTP
27606052760820216MbtH proteinQuickGO ontologyBLASTP
27610362761665630Putative regulatorQuickGO ontologyBLASTP
276175527633441590Non-ribosomal peptide synthetaseQuickGO ontologyBLASTP
27634382763608171Putative peptide synthetaseQuickGO ontologyBLASTP
276377027649061137putative hydroxylaseQuickGO ontologyBLASTP
276484927727207872putative non-ribosomal peptide synthetaseQuickGO ontologyBLASTP
277272627806247899putative non-ribosomal peptide synthetaseQuickGO ontologyBLASTP
278062127855914971non-ribosomal peptide synthaseQuickGO ontologyBLASTP