Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:1845000 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18450221845537516hypothetical proteinBLASTP
18457521846474723putative Phosphoglycolate phosphataseQuickGO ontologyBLASTP
184668418479371254Putative ATPGTP binding proteinQuickGO ontologyBLASTP
1847916184800590hypothetical protein
18480151848329315conserved hypothetical protein putative Antibiotic biosynthesis monooxygenase domainQuickGO ontologyBLASTP
18484641848613150hypothetical protein
184887618500361161putative glycosyl hydrolaseQuickGO ontologyBLASTP
18499821850845864hypothetical protein putative S-adenosyl-L-methionine-dependent methyltransferases domainQuickGO ontologyBLASTP
18508831851170288hypothetical proteinBLASTP
1851263185133472hypothetical protein
18523881852498111hypothetical protein
18525221852779258hypothetical protein putative signal peptideQuickGO ontology
18528001853135336hypothetical proteinBLASTP
1853140185323596hypothetical protein
18534591854376918hypothetical proteinBLASTP
18543731855029657hypothetical proteinBLASTP
18549921855258267hypothetical protein putative signal peptideQuickGO ontology
185555918566081050hypothetical proteinBLASTP
18566001857508909Putative transcriptional regulator GntR-familyQuickGO ontologyBLASTP
18575471858071525hypothetical protein
18582021858411210hypothetical protein
18584201858806387Plasmid replication integration and excision activatorQuickGO ontologyBLASTP
18588031859117315hypothetical proteinBLASTP
185920418608111608plasmid transfer proteinQuickGO ontologyBLASTP
186080818625111704Replication initiator proteinQuickGO ontologyBLASTP
18625451862730186excisionaseQuickGO ontologyBLASTP
18628761863163288hypothetical proteinBLASTP
18634011863619219hypothetical proteinBLASTP
18637091864353645hypothetical protein putative integrase domainQuickGO ontologyBLASTP
18644321864845414Putative integrase partialQuickGO ontologyBLASTP
18651241865312189hypothetical protein
186573518697213987putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP