Pre_GI Gene

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Host: NC_008271 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008271:248371 Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2483712506442274hypothetical proteinBLASTP
250864251136273hypothetical protein
251175251564390hypothetical protein
251746252690945hypothetical proteinBLASTP
253050253445396hypothetical protein
2540412553871347possible mycobacteriophage excisionaseQuickGO ontologyBLASTP
255545255916372hypothetical proteinBLASTP
255913256695783possible ATPase ParA typeQuickGO ontologyBLASTP
256905257429525hypothetical protein
2580062592411236hypothetical proteinBLASTP
259652260236585hypothetical protein
2603992617331335probable replication proteinQuickGO ontologyBLASTP
262281262538258hypothetical proteinBLASTP
262766263071306hypothetical protein
263068263592525hypothetical protein
263589264008420hypothetical protein
2640532652971245transposaseQuickGO ontologyBLASTP
265366265764399hypothetical protein
266034266465432possible repressor protein helix-turn-helix familyQuickGO ontologyBLASTP
266758267321564possible intracellular septation proteinQuickGO ontologyBLASTP
2673502684351086hypothetical protein
2684732696391167cytochrome P450 CYP258QuickGO ontologyBLASTP
2697312707861056hypothetical proteinBLASTP
270907271494588hypothetical protein
271506272093588hypothetical protein