Pre_GI Gene

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Host: NC_008269 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008269:667228 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6651146672312118hypothetical proteinBLASTP
6672286702633036hypothetical proteinBLASTP
670260670664405hypothetical proteinBLASTP
670703671020318hypothetical proteinBLASTP
6710116722731263hypothetical protein
6726936743481656possible DNA translocaseQuickGO ontologyBLASTP
674445674789345hypothetical protein
6747956761351341hypothetical proteinBLASTP
6762136774871275hypothetical protein
677506678240735hypothetical proteinBLASTP
678257678943687hypothetical protein
6790076800411035possible phage excisionaseQuickGO ontologyBLASTP
6805066825242019hypothetical proteinBLASTP
682538683032495hypothetical protein
683029683838810possible N-formylglutamate aminohydrolaseQuickGO ontologyBLASTP
6838386849891152hypothetical protein
685053685406354hypothetical protein
685462685803342probable transcriptional regulator ArsR familyQuickGO ontologyBLASTP
685930686436507hypothetical proteinBLASTP
686526687056531hypothetical proteinBLASTP
687236687589354hypothetical protein
687689688168480hypothetical protein
6883496893801032hypothetical proteinBLASTP
689521689769249hypothetical protein
690064690420357hypothetical protein
690456691151696hypothetical proteinBLASTP
691208691705498hypothetical protein