Pre_GI Gene

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Host: NC_008269 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008269:1067082 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
106591310670851173hypothetical proteinBLASTP
106708210705133432hypothetical proteinBLASTP
10705001071288789hypothetical proteinBLASTP
107128510728141530hypothetical proteinBLASTP
10729401073404465hypothetical protein
10738001074579780hypothetical proteinBLASTP
10748881075742855hypothetical proteinBLASTP
107573910768241086hypothetical proteinBLASTP
10770611077528468hypothetical proteinBLASTP
10775421078141600hypothetical proteinBLASTP
10781991079179981hypothetical proteinBLASTP
107919710802461050hypothetical proteinBLASTP
108085310820161164hypothetical proteinBLASTP
108209110834551365hypothetical proteinBLASTP
108347510851121638probable subtilase family serine proteinaseQuickGO ontologyBLASTP
10851121085555444hypothetical protein
10858391086225387hypothetical proteinBLASTP
10865891087443855possible site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
10874601087765306hypothetical protein
10883101088813504hypothetical proteinBLASTP
10892671089392126hypothetical proteinBLASTP
10893891090000612possible pterin-4a-carbinolamine dehydrataseQuickGO ontologyBLASTP