Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:7576365 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
757636575775791215probable formyl-CoA transferaseQuickGO ontologyBLASTP
757759475790961503aldehyde dehydrogenase NADQuickGO ontologyBLASTP
75791507579719570adenylate kinaseQuickGO ontologyBLASTP
757979175806969063-hydroxyisobutyrate dehydrogenaseQuickGO ontologyBLASTP
75809017581272372hypothetical protein
758157375828171245transposase IS1164QuickGO ontologyBLASTP
758306575842371173possible epoxide hydrolaseQuickGO ontologyBLASTP
75843417584916576hypothetical proteinBLASTP
75851007585342243hypothetical protein
758540775867231317transporter MFS superfamilyQuickGO ontologyBLASTP
75867067587590885transcriptional regulatorQuickGO ontologyBLASTP
75880387588931894dihydrodipicolinate synthaseQuickGO ontologyBLASTP
758922275907151494multidrug resistance transporter MFS superfamilyQuickGO ontologyBLASTP
75913387591616279hypothetical protein
75916967592271576possible acetyltransferaseQuickGO ontologyBLASTP
759235875937611404probable ferredoxin--NADP reductaseQuickGO ontologyBLASTP
75937787594665888hypothetical proteinBLASTP
75949077595299393hypothetical protein
75954197595751333hypothetical protein
75957847596422639probable transcriptional regulator TetR familyQuickGO ontologyBLASTP
75966507597261612hypothetical protein
75974467597832387hypothetical protein
75978157598144330possible cytosine adenosine deaminaseQuickGO ontologyBLASTP
75984837598812330hypothetical proteinBLASTP
75989257599104180hypothetical protein
759947776008471371alpha-ketoglutarate transporter MFS superfamilyQuickGO ontologyBLASTP