Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:442657 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
442657443520864probable hydrolaseQuickGO ontologyBLASTP
443606444277672probable tetracycline repressor proteinQuickGO ontologyBLASTP
4443804458791500probable betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP
445899446723825probable carveol dehydrogenaseQuickGO ontologyBLASTP
446903447889987possible acetyltransferaseQuickGO ontology
4480584492271170ring hydroxylating dioxygenase large subunit of terminal oxygenaseQuickGO ontologyBLASTP
4493244505771254cytochrome P450 CYP254QuickGO ontologyBLASTP
450698450925228probable ferredoxin FdxDQuickGO ontologyBLASTP
450931451812882short chain dehydrogenasereductaseQuickGO ontologyBLASTP
451881452180300hypothetical protein
4522414535901350aromatic acid transporter protein MFS superfamilyQuickGO ontologyBLASTP
4536774548671191probable naphthalene 12-dioxygenaseQuickGO ontologyBLASTP
4549134563611449probable betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP
456425457084660probable tetracycline repressor proteinQuickGO ontologyBLASTP
457084457620537probable nitrilotriacetate monooxygenase component BQuickGO ontologyBLASTP
457632457946315hypothetical protein
457930458490561hypothetical protein
458487458969483hypothetical proteinBLASTP
4589894601641176possible nonspecific lipid-transfer proteinQuickGO ontologyBLASTP
460161460643483hypothetical proteinBLASTP
460718461539822probable carveol dehydrogenaseQuickGO ontologyBLASTP
4615894628121224monooxygenaseQuickGO ontologyBLASTP