Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:3335035 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
333503533364861452hypothetical proteinBLASTP
33366153336863249hypothetical protein
33370393337482444hypothetical proteinBLASTP
33379573338217261hypothetical protein
33382353338612378hypothetical protein
33386433339236594probable undecaprenol kinaseQuickGO ontologyBLASTP
33393673339717351hypothetical protein
33397813340632852hypothetical protein
33407053340815111hypothetical protein
33411343341421288hypothetical protein
33414523341988537resolvaseQuickGO ontologyBLASTP
334202833435841557possible transposaseQuickGO ontologyBLASTP
33437653344301537hypothetical protein
33443993345196798hypothetical proteinBLASTP
334519333464761284hypothetical proteinBLASTP
33469943347185192hypothetical protein
33471823347787606possible replicative DNA helicaseQuickGO ontology
33479243348859936possible resolvase N-terminalQuickGO ontologyBLASTP
334925533504661212possible transcriptional regulatorQuickGO ontologyBLASTP
335085333519321080possible phenylalanine dehydrogenaseQuickGO ontologyBLASTP
335194233533601419phenylalanine-specific permeaseQuickGO ontologyBLASTP
3353475335468912154-hydroxyphenylpyruvate dioxygenaseQuickGO ontologyBLASTP
33551053355479375hypothetical proteinBLASTP
33556153356343729hypothetical proteinBLASTP
33565543356877324hypothetical protein
335697933580011023hypothetical proteinBLASTP