Pre_GI Gene

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Host: NC_008268 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:1748635 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17486351749618984probable phosphoesteraseQuickGO ontologyBLASTP
174970217510451344probable stomatin proteinQuickGO ontologyBLASTP
17511781751987810possible pyridoxamine 5prime-phosphate oxidase-related proteinQuickGO ontologyBLASTP
17520941752654561hypothetical proteinBLASTP
17526651752850186hypothetical protein
17529541753316363possible transposaseQuickGO ontologyBLASTP
17534031753762360probable transposaseQuickGO ontologyBLASTP
17537441753983240hypothetical protein
175398017551101131probable transposaseQuickGO ontologyBLASTP
175567517570331359probable site specific restriction modification enzyme subunitQuickGO ontologyBLASTP
17571451757339195possible transposaseQuickGO ontologyBLASTP
17574931757735243hypothetical protein
175772017592821563sigma factor sigma 70 type probable group 2QuickGO ontologyBLASTP
17592861759783498hypothetical proteinBLASTP
17597741760637864possible ATPases involved in chromosome partitioningQuickGO ontologyBLASTP
176071217624361725possible DNA repair helicaseQuickGO ontologyBLASTP
176242117677335313possible DNA helicaseQuickGO ontologyBLASTP
176786717697111845hypothetical proteinBLASTP
17697101770285576probable tellerium resistance proteinQuickGO ontologyBLASTP
177043217723961965hypothetical proteinBLASTP