Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:2134110 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
213339121341287381-5-phosphoribosyl-5-5- phosphoribosylaminomethylideneamino imidazole-4-carboxamide isomeraseQuickGO ontologyBLASTP
21341102134886777Iimidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
21348802135491612histidine biosynthesis protein HisIEQuickGO ontologyBLASTP
21356772136654978chain length determinant proteinQuickGO ontologyBLASTP
213679721379631167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
2138213213961914076-phosphogluconate dehydrogenase decarboxylatingQuickGO ontologyBLASTP
213978221411521371phosphomannomutaseQuickGO ontologyBLASTP
214123521426861452mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
214266421438691206putative glycosyltransferaseQuickGO ontologyBLASTP
214389021448971008UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
214491421460591146hypothetical glycosyltransferaseQuickGO ontologyBLASTP
214604621470771032putative glycosyltransferaseQuickGO ontologyBLASTP
21470742147934861putative glycosyltransferaseQuickGO ontologyBLASTP
214794021492831344hypothetical antigen polymeraseQuickGO ontologyBLASTP
214928321505211239putative O antigen flippaseQuickGO ontologyBLASTP
21508962151789894UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
215196421533581395colanic acid biosynthesis protein WcaMQuickGO ontologyBLASTP
215336921545891221putative colanic acid biosynthesis glycosyl transferase WcaLQuickGO ontologyBLASTP
215458621558661281colanic acid biosynthesis protein WcaKQuickGO ontologyBLASTP
215643221579101479lipopolysaccharide biosynthesis protein WzxCQuickGO ontologyBLASTP
215791221593061395putative colanic biosynthesis UDP-glucose lipid carrier transferaseQuickGO ontologyBLASTP
215936121607311371phosphomannomutaseQuickGO ontologyBLASTP
216092421623601437mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
216236321635861224putative colanic acid biosynthesis glycosyl transferase WcaIQuickGO ontologyBLASTP
21635832164062480GDP-mannose mannosyl hydrolaseQuickGO ontologyBLASTP