Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:1228485 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
122642812284882061putative tail fiber proteinQuickGO ontologyBLASTP
12284851228763279hypothetical proteinBLASTP
12287761229069294hypothetical proteinBLASTP
12291611230018858iron transport protein inner membrane componentQuickGO ontologyBLASTP
12300151230872858iron transport protein inner membrane componentQuickGO ontologyBLASTP
12308691231696828iron transport protein ATP-binding componentQuickGO ontologyBLASTP
12316961232610915iron transport protein periplasmic-binding proteinQuickGO ontologyBLASTP
12328891233482594putative acetyltransferase proteinQuickGO ontologyBLASTP
12337371234321585probable transcriptional regulatorQuickGO ontologyBLASTP
12343461234783438hypothetical acetyltransferase YjaBQuickGO ontologyBLASTP
12350571235224168hypothetical protein
12352631235415153truncated isocitrate dehydrogenase NADPQuickGO ontologyBLASTP
12356771236081405hypothetical protein YcgXQuickGO ontologyBLASTP
12363021237033732hypothetical transcriptional regulator YcgEQuickGO ontologyBLASTP
123723812384491212hypothetical protein YcgFQuickGO ontologyBLASTP
12387631238999237hypothetical protein YcgZQuickGO ontologyBLASTP
12390421239314273hypothetical protein YmgAQuickGO ontologyBLASTP
12393431239609267hypothetical protein YmgBQuickGO ontologyBLASTP
12397221239970249hypothetical protein YmgCQuickGO ontologyBLASTP
12403101241161852hypothetical proteinBLASTP
12412571241511255hypothetical protein YmgFQuickGO ontologyBLASTP
12419091242088180part of hypothetical protein b1169QuickGO ontologyBLASTP
12423781242755378part of hypothetical protein b1169 putative adhesinQuickGO ontologyBLASTP
12429011243428528part of hypothetical protein b1170 putative autotransporterQuickGO ontologyBLASTP
12434861243815330hypothetical protein YmgD precursorQuickGO ontologyBLASTP
12438251244109285hypothetical protein
12441711244344174hypothetical proteinBLASTP
12444451244630186hypothetical proteinBLASTP
12447621245088327part of hypothetical protein b2647 putative autotransporterQuickGO ontologyBLASTP
12451341245319186hypothetical proteinBLASTP
12454611245727267cell division topological specificity factorQuickGO ontologyBLASTP
12457311246543813septum site-determining protein MinDQuickGO ontologyBLASTP
12465671247262696septum site-determining protein MinCQuickGO ontologyBLASTP
12474021247629228hypothetical proteinBLASTP
12477821248150369hypothetical protein YcgJ precursorQuickGO ontologyBLASTP
12482531248654402protein YcgK precursorQuickGO ontologyBLASTP
12488631249189327putative cytoplasmic protein YcgLQuickGO ontologyBLASTP
12492611249920660putative fumarylacetoacetate FAA hydrolase familyQuickGO ontologyBLASTP
12499971250458462hypothetical protein YcgNQuickGO ontologyBLASTP
12506651250946282truncated hemolysin EQuickGO ontologyBLASTP
12512381251657420UmuD proteinQuickGO ontologyBLASTP
125165712529251269UmuC proteinQuickGO ontologyBLASTP