Pre_GI Gene

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Host: NC_008149 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008149:1718000 Yersinia pestis Nepal516, complete genome

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17181161718679564lipoproteinQuickGO ontologyBLASTP
171907417202791206membrane proteinQuickGO ontologyBLASTP
17205731721157585ribosomal-protein-alanine acetyltransferaseQuickGO ontologyBLASTP
172116517227751611oxidoreductaseQuickGO ontologyBLASTP
172304217245771536membrane proteinQuickGO ontologyBLASTP
172506517267261662hemolysin activator proteinQuickGO ontologyBLASTP
172687617314864611hemolysinQuickGO ontologyBLASTP
173171717334471731arginyl-tRNA synthetaseQuickGO ontologyBLASTP
17340581734633576hypothetical proteinBLASTP
17348651735629765copper homeostasis proteinQuickGO ontologyBLASTP