Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:3349415 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33494153350131717Phosphoglycerate mutaseQuickGO ontologyBLASTP
33501283350976849undecaprenol kinase putativeQuickGO ontologyBLASTP
33510043351315312hypothetical proteinBLASTP
335144933524801032lipoprotein putativeQuickGO ontologyBLASTP
33524803352731252hypothetical proteinBLASTP
335272833537981071dihydroorotate dehydrogenaseQuickGO ontologyBLASTP
33538813354417537YbhB and YbcLQuickGO ontologyBLASTP
335444533557791335peptidase M20QuickGO ontologyBLASTP
335592333575691647RecombinaseQuickGO ontologyBLASTP
335775933592581500putative plasmid replication initiator proteinQuickGO ontologyBLASTP
335926333607081446cell divisionFtsKSpoIIIEQuickGO ontologyBLASTP
33608013361145345regulatory proteinQuickGO ontologyBLASTP
33613993362199801hypothetical proteinBLASTP
33622063362673468NUDIX hydrolaseQuickGO ontologyBLASTP
33626823363149468metal dependent phosphohydrolaseQuickGO ontologyBLASTP
33635683363810243hypothetical proteinBLASTP
336380733652911485UBATHIF-type NADFAD binding foldQuickGO ontologyBLASTP
336557933665921014hypothetical proteinBLASTP
336657933676941116PatatinQuickGO ontologyBLASTP
33678723368615744hypothetical proteinBLASTP
33686123369193582hypothetical proteinBLASTP
33701383370959822Integrase catalytic regionQuickGO ontologyBLASTP
33709923371339348transposase IS3IS911QuickGO ontologyBLASTP
33713723371812441putative transposaseQuickGO ontologyBLASTP
337185333730521200acyl-CoA dehydrogenase-like proteinQuickGO ontologyBLASTP
337321333743191107Alcohol dehydrogenase GroES-like proteinQuickGO ontologyBLASTP
33744683374878411hypothetical proteinBLASTP
337497033760281059hypothetical proteinBLASTP
337607833772231146acyl-CoA dehydrogenase-like proteinQuickGO ontologyBLASTP
337726233788931632AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
33789083379561654hypothetical proteinBLASTP
337955833810151458cytochrome P450QuickGO ontologyBLASTP