Pre_GI Gene

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Host: NC_007948 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007948:4646344 Polaromonas sp. JS666, complete genome

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46463444647279936binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
464727646484571182mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
46484544649431978binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
464949646511211626Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
465203546536601626Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
465374146547751035transcriptional regulator LysR familyQuickGO ontologyBLASTP
465495946561101152Extracellular ligand-binding receptorQuickGO ontologyBLASTP
465618246572251044extracellular solute-binding protein family 1QuickGO ontologyBLASTP
46574204658331912transcriptional regulator LysR familyQuickGO ontologyBLASTP
465844346595701128mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
46595714659939369Endoribonuclease L-PSPQuickGO ontologyBLASTP
466004746614231377BFD-like 2Fe-2S-binding regionQuickGO ontologyBLASTP
46614134661769357hypothetical proteinBLASTP
466175946628951137FAD dependent oxidoreductaseQuickGO ontologyBLASTP
46629964663802807binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
46637994664671873binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
466466446657341071ABC transporter relatedQuickGO ontologyBLASTP
466579346668211029extracellular solute-binding protein family 1QuickGO ontologyBLASTP
46673244668238915transcriptional regulator LysR familyQuickGO ontologyBLASTP
466833746693951059Uncharacterized protein UPF0065QuickGO ontologyBLASTP
466971146708291119FAD dependent oxidoreductaseQuickGO ontologyBLASTP
46708134671124312putative sarcosine oxidase alpha subunitQuickGO ontologyBLASTP
467112146726051485BFD-like 2Fe-2S-binding regionQuickGO ontologyBLASTP
46726164672984369Endoribonuclease L-PSPQuickGO ontologyBLASTP
46730044673390387hypothetical protein
46734344673973540hypothetical proteinBLASTP
46747804675070291hypothetical protein
467510646777362631hypothetical proteinBLASTP
467791046791001191hypothetical proteinBLASTP
467909746804011305hypothetical proteinBLASTP
4680697468077276tRNA-PheQuickGO ontologyBLASTP
46808304681507678two component transcriptional regulator Fis familyQuickGO ontologyBLASTP
468157646838732298multi-sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
46838704684514645putative proline rich signal peptide proteinQuickGO ontologyBLASTP
468449546858321338sun proteinQuickGO ontologyBLASTP
468613846874301293FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
46874514687789339Cytochrome c553-likeQuickGO ontologyBLASTP
468794246889491008peptidase M48 Ste24pQuickGO ontologyBLASTP
46892564689849594LemAQuickGO ontologyBLASTP
469016246943884227DNA-directed RNA polymerase subunit beta-primeQuickGO ontologyBLASTP