Pre_GI Gene

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Host: NC_006576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006576:2683467 Synechococcus elongatus PCC 6301, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
32313511029iron-stress chlorophyll-binding proteinQuickGO ontologyBLASTP
17692023255panthotenate metabolism flavoproteinQuickGO ontologyBLASTP
20262481456similar to plasmid stabilization protein StbB homologQuickGO ontologyBLASTP
245938561398putative ribonuclease IIQuickGO ontologyBLASTP
528966081320probable amidaseQuickGO ontologyBLASTP
70997659561DNA polymerase VQuickGO ontologyBLASTP
771689721257DNA polymerase VQuickGO ontologyBLASTP
90229786765hypothetical proteinBLASTP
1034311335993ketol-acid reductoisomeraseQuickGO ontologyBLASTP
1133412227894hypothetical proteinBLASTP
1223012823594ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
1287613718843hypothetical proteinBLASTP
268346726859832517nitrogen assimilation regulatory proteinQuickGO ontologyBLASTP
26860412686370330hypothetical protein YCF49QuickGO ontologyBLASTP
268642826874471020hypothetical proteinBLASTP
26875072687932426probable molybdenum-pterin binding proteinQuickGO ontologyBLASTP
26880232688838816molybdate-binding periplasmic proteinQuickGO ontologyBLASTP
26888352689500666ATP-binding protein of molybdate ABC transporterQuickGO ontologyBLASTP
26895562690317762succinate dehydrogenaseQuickGO ontologyBLASTP
269044026926472208hypothetical proteinBLASTP
26926842693169486possible Rubisco chaperoninQuickGO ontologyBLASTP
26931592693839681probable amidotransferaseQuickGO ontologyBLASTP
26942262694591366hypothetical proteinBLASTP
26947412695043303hypothetical proteinBLASTP
26950812695791711hypothetical proteinBLASTP
26958811380flavodoxinQuickGO ontology