Pre_GI Gene

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Host: NC_006569 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006569:69939 Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Ruegeria pomeroyi is capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6919069942753polar amino acid uptake family ABC transporter permease proteinQuickGO ontologyBLASTP
6993970727789polar amino acid uptake family ABC transporter permease proteinQuickGO ontologyBLASTP
7080071285486hypothetical proteinBLASTP
7128671747462arsenate reductaseQuickGO ontologyBLASTP
7174472142399hypothetical proteinBLASTP
7213572728594hypothetical proteinBLASTP
7275373649897hydrolase carbon-nitrogen familyQuickGO ontologyBLASTP
7372073938219translation initiation factor IF-1QuickGO ontologyBLASTP
7394974527579maf proteinQuickGO ontologyBLASTP
74524755461023ribonuclease RneRng familyQuickGO ontologyBLASTP
7554375725183hypothetical proteinBLASTP
758057587975tRNA-PheQuickGO ontology
76107774321326hypothetical proteinBLASTP
77422792631842hypothetical proteinBLASTP
79377804801104hypothetical protein
8069580895201hypothetical protein
8096181179219DNA-binding protein putativeQuickGO ontologyBLASTP
82940847511812hypothetical proteinBLASTP
85721869231203site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
87709900122304hypothetical protein
9060791137531hypothetical protein
9135491923570ISSpo7 transposaseQuickGO ontologyBLASTP
9204592353309IS3 family transposase orfAQuickGO ontologyBLASTP
9250292639138BLASTP
93195946821488FAD binding domain proteinQuickGO ontologyBLASTP
9467995089411hypothetical proteinBLASTP
95089961381050hypothetical proteinBLASTP
96657976911035histone deacetylaseAcuCAphA family proteinQuickGO ontologyBLASTP
9776598703939branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
9870099569870branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
99566100270705branched-chain amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
100267100980714branched-chain amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
1009841022641281branched-chain amino acid ABC transporter periplasmic branched-chain amino acid-binding protein putativeQuickGO ontologyBLASTP
102382103350969transcriptional regulator LuxR familyQuickGO ontologyBLASTP