Pre_GI Gene

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Host: NC_006569 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006569:370846 Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Ruegeria pomeroyi is capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
370463370852390methylglyoxal synthaseQuickGO ontologyBLASTP
3708463715056602-dehydro-3-deoxyphosphogluconate aldolaseQuickGO ontologyBLASTP
3714843724319482-dehydro-3-deoxygluconokinase putativeQuickGO ontologyBLASTP
3724413742371797dihydroxy-acid dehydrataseQuickGO ontologyBLASTP
3742383755031266TRAP dicarboxylate transporter DctM subunitQuickGO ontologyBLASTP
375570376130561TRAP dicarboxylate family transporter DctQ subunitQuickGO ontologyBLASTP
3762033772221020TRAP dicarboxylate family transporter DctP subunitQuickGO ontologyBLASTP
3773483783821035transcriptional regulator LacI familyQuickGO ontologyBLASTP
3791793814702292hypothetical protein
381777382751975transcriptional regulator LysR familyQuickGO ontologyBLASTP
383108383779672HAD-superfamily hydrolase subfamily IBQuickGO ontologyBLASTP
383776384009234tautomerase putativeQuickGO ontologyBLASTP
384039384818780hypothetical proteinBLASTP
384945385730786hypothetical proteinBLASTP
385776386387612hypothetical proteinBLASTP
386564387508945transcriptional regulator LysR familyQuickGO ontologyBLASTP
387556388539984oxidoreductase aldoketo reductase familyQuickGO ontologyBLASTP
388536388925390carboxymuconolactone decarboxylase family proteinQuickGO ontologyBLASTP
3889473901341188hypothetical proteinBLASTP