Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:3690828 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
369082836918531026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3691863369305911972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
36932623694194933ADP-L-Glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
369419736952431047ADP-heptose-LPS heptosyltransferase IIQuickGO ontologyBLASTP
36952433696196954lipopolysaccharide heptosyltransferase-1QuickGO ontologyBLASTP
369623636974501215O-antigen ligaseQuickGO ontologyBLASTP
369750636986511146lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
36987513699560810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
36997103700408699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
370043137014411011lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
370145937024721014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
370247837035571080lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
37035713704551981hypothetical proteinBLASTP
37046073705404798lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
370539737065211125lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
370651837075521035lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
3707997370927412783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
37092833709762480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
37097903710599810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
3710697371086416850S ribosomal protein L33QuickGO ontologyBLASTP
3710885371112123750S ribosomal protein L28QuickGO ontologyBLASTP
37113393712004666DNA repair protein RadCQuickGO ontologyBLASTP
371218037134001221phosphopantothenoylcysteine synthasedecarboxylaseQuickGO ontologyBLASTP
37133813713836456deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
37139443714540597nucleoid occlusion proteinQuickGO ontologyBLASTP
37146183715259642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
37153383716054717ribonuclease PHQuickGO ontologyBLASTP