Pre_GI Gene

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Host: NC_006363 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006363:36959 Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36959398052847hypothetical proteinBLASTP
39827419502124hypothetical proteinBLASTP
4203842226189hypothetical protein
4236143140780hypothetical protein
4323643796561hypothetical proteinBLASTP
4391044254345hypothetical protein
45007476552649hypothetical proteinBLASTP
4785348404552putative resolvaseQuickGO ontologyBLASTP
4855949002444hypothetical protein
4904149550510putative acetyltransferaseQuickGO ontology
4993450272339hypothetical protein
5027550532258hypothetical protein
50734517651032hypothetical proteinBLASTP
5217152512342hypothetical protein
5302253444423hypothetical protein
5365353982330hypothetical protein
54035552971263hypothetical protein
5539455753360hypothetical protein
5655856848291hypothetical protein
5757158266696putative transposaseQuickGO ontologyBLASTP
5835858759402putative transcriptional regulatorQuickGO ontologyBLASTP
58756597571002putative alkylmercury lyaseQuickGO ontologyBLASTP
59804608411038putative recombinaseQuickGO ontologyBLASTP
6094061173234putative transposaseQuickGO ontologyBLASTP