Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:2883476 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
288347628850471572stage V sporulation protein BQuickGO ontologyBLASTP
288522528864451221multidrug efflux proteinQuickGO ontologyBLASTP
28864632887047585hypothetical proteinBLASTP
288754528886301086putative oxidoreductaseQuickGO ontologyBLASTP
28892512890024774IS21 family transposaseQuickGO ontologyBLASTP
289002128914781458transposaseQuickGO ontologyBLASTP
289185628939522097O-antigen biosynthesis-related proteinQuickGO ontologyBLASTP
289434528958711527transposase subunitQuickGO ontologyBLASTP
28958752896630756transposase subunitQuickGO ontologyBLASTP
28969562897210255putative insertion sequence ATP-binding proteinQuickGO ontologyBLASTP
289765628991401485polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
289945729005871131transposaseQuickGO ontologyBLASTP
290067829020361359transposaseQuickGO ontologyBLASTP
290294929040281080putative glycosyl transferaseQuickGO ontologyBLASTP
290407629053471272putative polysaccharide polymeraseQuickGO ontology
290599729072051209hypothetical proteinBLASTP
29073002907638339putative transposaseQuickGO ontology
29081612909147987UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
290917629102611086putative glycosyl transferaseQuickGO ontologyBLASTP
29103672911251885UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
291136029130481689putative transposaseQuickGO ontologyBLASTP
29130692914034966UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
291405529154311377sugar transferase involved in lipopolysaccharide synthesisQuickGO ontologyBLASTP
29159522916224273hypothetical protein
29164062916699294hypothetical protein
29168232917659837hypothetical proteinBLASTP
291766029190481389transposaseQuickGO ontologyBLASTP
29191292919743615hypothetical proteinBLASTP
29201942920583390hypothetical protein
292086829226671800ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
292266829244791812ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
29251612925670510hypothetical proteinBLASTP
292568829270081321BLASTP
292572529269871263group II intron-encoding maturase N-terminally truncatedQuickGO ontologyBLASTP