Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:280234 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
280234281076843ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
281161281892732hypothetical protein
2823412834351095NADNADP octopinenopaline dehydrogenaseQuickGO ontologyBLASTP
2834432850741632methionine synthase I cobalamin-binding domainQuickGO ontologyBLASTP
2850912866111521asparagine synthetase BQuickGO ontologyBLASTP
2867032877491047putative cation transporterQuickGO ontologyBLASTP
288165289736157216S ribosomal RNAQuickGO ontologyBLASTP
290021292969294923S ribosomal RNAQuickGO ontologyBLASTP
2930152931281145S ribosomal RNAQuickGO ontologyBLASTP
29313029320879tRNA-LysQuickGO ontologyBLASTP
29321129328979tRNA-GluQuickGO ontologyBLASTP
29331229339180tRNA-MetQuickGO ontologyBLASTP
29339429347279tRNA-PheQuickGO ontologyBLASTP
29347529356288tRNA-TyrQuickGO ontologyBLASTP
29356629364479tRNA-GlyQuickGO ontologyBLASTP
29364929372779tRNA-AlaQuickGO ontologyBLASTP
29375629383479tRNA-ValQuickGO ontologyBLASTP
29385129393080tRNA-AspQuickGO ontologyBLASTP
29393329402694tRNA-LeuQuickGO ontologyBLASTP
29407329415179tRNA-ThrQuickGO ontologyBLASTP
29415229423180tRNA-IleQuickGO ontology
29423829431780tRNA-MetQuickGO ontology
294624296195157216S ribosomal RNAQuickGO ontologyBLASTP
296481299430295023S ribosomal RNAQuickGO ontologyBLASTP
2994762995891145S ribosomal RNAQuickGO ontologyBLASTP
299955300356402hypothetical proteinBLASTP
300476301267792hypothetical protein
301460301687228hypothetical protein
301945302181237hypothetical protein
302205302891687hypothetical proteinBLASTP
303708304079372hypothetical protein
304162304452291hypothetical protein
304634305323690hypothetical protein
305389305562174hypothetical protein
306480307160681transposaseQuickGO ontologyBLASTP
307255307527273hypothetical proteinBLASTP
3076823092081527transposase subunitQuickGO ontologyBLASTP
309212309967756transposase subunitQuickGO ontologyBLASTP
310227311000774IS21 family transposaseQuickGO ontologyBLASTP
3109973125111515transposaseQuickGO ontologyBLASTP
312843313622780transposaseQuickGO ontologyBLASTP
3137813152381458hypothetical proteinBLASTP
315658316614957hypothetical proteinBLASTP
316616317119504hypothetical protein
317244317480237hypothetical protein
317660318295636hypothetical protein
318296319207912hypothetical proteinBLASTP