Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:2398482 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23984822398904423phosphoglycerate dehydrogenase N-terminal domainQuickGO ontologyBLASTP
23989232399891969iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
23998252400043219hypothetical proteinBLASTP
24000942400246153pyridoxal phosphate biosynthetic protein variantQuickGO ontologyBLASTP
24002432400593351pyridoxal phosphate biosynthetic protein variantQuickGO ontologyBLASTP
240060024022301631BLASTP
24006372401557921group II intron-encoding maturase variantQuickGO ontologyBLASTP
24014822401682201group II intron-encoding maturase variantQuickGO ontology
240237224040841713hypothetical proteinBLASTP
24041562404341186hypothetical protein
24046312404792162hypothetical protein
240496324066091647transposase-like proteinQuickGO ontologyBLASTP
240661124077951185hypothetical proteinBLASTP
24081242409017894transposaseQuickGO ontologyBLASTP
240907824107241647transposase-like proteinQuickGO ontologyBLASTP
24106702411128459hypothetical proteinBLASTP
241174324137582016hypothetical proteinBLASTP
24139892414216228hypothetical proteinBLASTP
241428024154821203hypothetical proteinBLASTP
24155532415717165hypothetical proteinBLASTP
241606424172841221hypothetical protein
241753824200602523hypothetical proteinBLASTP
242007624212781203hypothetical proteinBLASTP
24213492421888540hypothetical proteinBLASTP
24219062422553648TetR family transcriptional regulatorQuickGO ontologyBLASTP
242266124238091149hypothetical proteinBLASTP
24240482424860813hypothetical proteinBLASTP
24249072425134228hypothetical proteinBLASTP
242535224270011650hypothetical proteinBLASTP
242702524281761152hypothetical proteinBLASTP
242818124293681188putative DNA modification methylaseQuickGO ontologyBLASTP
242942424310341611putative DNA methylaseQuickGO ontologyBLASTP
24313162431720405putative transposaseQuickGO ontologyBLASTP
24319842432649666hypothetical proteinBLASTP
243270924341181410transposaseQuickGO ontologyBLASTP
24341192434955837hypothetical proteinBLASTP
243524724368931647transposase-like proteinQuickGO ontologyBLASTP
24375562438074519hypothetical protein
24388682439098231hypothetical protein
243914424419302787hypothetical proteinBLASTP
244213924433111173DNA polymerase III-like proteinQuickGO ontologyBLASTP
24449292445489561hypothetical protein serine-richQuickGO ontology
244560124468691269hypothetical protein
24468762447394519hypothetical protein
24476662448160495transposaseQuickGO ontologyBLASTP
24481232448770648hypothetical protein
24495272449958432hypothetical proteinBLASTP
24501712450917747hypothetical protein
245099824522901293transposaseQuickGO ontologyBLASTP
24521272452873747hypothetical proteinBLASTP
2453484245410161850S ribosomal protein L25QuickGO ontologyBLASTP
245488224567501869hypothetical proteinBLASTP
24568772457077201hypothetical protein
245706724595892523hypothetical proteinBLASTP
245960524607801176hypothetical proteinBLASTP
246125324627581506transposaseQuickGO ontologyBLASTP