Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:1422932 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
142293214239631032iron ABC transporter permease proteinQuickGO ontologyBLASTP
142396014249731014iron ABC transporter permease proteinQuickGO ontologyBLASTP
142496014260031044iron-siderophore uptake ABC system substrate-binding componentQuickGO ontologyBLASTP
14260341427029996hypothetical protein histidine-richQuickGO ontology
14273671427777411hypothetical protein
14278281428076249hypothetical protein
14280731428234162hypothetical protein
14283561428955600hypothetical proteinBLASTP
142899714306551659transposase-like proteinQuickGO ontologyBLASTP
143060114321481548hypothetical proteinBLASTP
143239314335201128hypothetical proteinBLASTP
14338471434131285hypothetical protein
14341741434545372transposase-like proteinQuickGO ontologyBLASTP
14346751435229555transposase-like proteinQuickGO ontologyBLASTP
14352011435800600transposase-like proteinQuickGO ontologyBLASTP
14358701436652783transposase subunitQuickGO ontologyBLASTP
14366931437097405transposase-like proteinQuickGO ontologyBLASTP
14375341438253720hypothetical proteinBLASTP
14382811438979699endonuclease IIIQuickGO ontologyBLASTP
143898314410642082putative DNA helicaseQuickGO ontologyBLASTP
14410681441865798hypothetical proteinBLASTP
144186514436821818hypothetical proteinBLASTP
144368214470443363putative DNA helicaseQuickGO ontologyBLASTP