Pre_GI Gene

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Host: NC_005139 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005139:343500 Vibrio vulnificus YJ016 chromosome I, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3439443451761233outer membrane capsular polysaccharide transport proteinQuickGO ontologyBLASTP
345316345687372hypothetical proteinBLASTP
345845346285441cytoplasmic phosphataseQuickGO ontologyBLASTP
3465203487002181putative tyrosine-protein kinase WzcQuickGO ontologyBLASTP
3487693499081140UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
3499903512521263UDP-N-acetyl-D-mannosaminuronate dehydrogenaseQuickGO ontologyBLASTP
3512003525191320hypothetical proteinBLASTP
3525203537371218hypothetical protein
353721354437717hypothetical protein
354394354813420hypothetical proteinBLASTP
3552953563441050hypothetical proteinBLASTP
3563413574231083hypothetical proteinBLASTP
3574383585591122GDP-mannose-46-dehydrataseQuickGO ontologyBLASTP
3585883595951008putative nucleotide di-P-sugar epimerase or dehydrataseQuickGO ontologyBLASTP
359606360088483putative GDP-mannose mannosylhydrolaseQuickGO ontologyBLASTP
3600853614941410mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
3614983629071410phosphomannomutaseQuickGO ontologyBLASTP
3629043640551152putitive LPS biosynthesis proteinQuickGO ontologyBLASTP
364052364672621glutamine amidotransferaseQuickGO ontologyBLASTP
364659365441783imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
3654853676262142putatve zinc-binding dehydrogenaseQuickGO ontologyBLASTP
3676233694341812hypothetical proteinBLASTP
369052369174123hypothetical protein
3694343706931260predicted glycosyltransferaseQuickGO ontologyBLASTP
370674371291618putative UDP-galactose phosphate transferaseQuickGO ontologyBLASTP
371227371955729putative acetyltransferaseQuickGO ontologyBLASTP
3721093732841176pilin glycosylation proteinQuickGO ontologyBLASTP
3734003753521953predicted nucleoside-diphosphate sugar epimeraseQuickGO ontologyBLASTP
3755133766941182predicted UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP