Pre_GI Gene

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Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:4513900 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45139004514595696Vi polysaccharide export ATP-binding proteinQuickGO ontologyBLASTP
45146214515415795Vi polysaccharide export inner-membrane protein ABC-2 type transporterQuickGO ontologyBLASTP
451542545164921068Vi polysaccharide export proteinQuickGO ontologyBLASTP
451653745182731737Vi polysaccharide biosynthesis protein TviE Glycosyl transferase group 1QuickGO ontologyBLASTP
45182894518792504insertion element IS1 protein InsBQuickGO ontologyBLASTP
45187114518986276insertion element IS1 proteinQuickGO ontologyBLASTP
451905045215452496Vi polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
452156945226151047Vi polysaccharide biosynthesis protein epimeraseQuickGO ontologyBLASTP
452261845238951278Vi polysaccharide biosynthesis protein UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
45241404524679540Vi polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
45252204525408189hypothetical proteinBLASTP
452553345270441512putative DNA helicaseQuickGO ontologyBLASTP
452702845286171590hypothetical proteinBLASTP
452878145297941014probable phage integraseQuickGO ontologyBLASTP
45302214530514294hypothetical proteinBLASTP
45305114530999489hypothetical proteinBLASTP
45311794531631453hypothetical proteinBLASTP
453226845345532286hypothetical proteinBLASTP
453463445363071674hypothetical proteinBLASTP
45368544537315462hypothetical proteinBLASTP
45373124537533222transcriptional regulatory proteinQuickGO ontologyBLASTP
45375674537710144hypothetical protein
45379264538252327hypothetical proteinBLASTP
45383904539172783hypothetical proteinBLASTP
45391974539409213hypothetical protein
45397994540077279integrase fragmentQuickGO ontologyBLASTP
454015345413431191hypothetical proteinBLASTP
454165445429131260bacteriophage integraseQuickGO ontologyBLASTP
4543073454314876tRNA-PheQuickGO ontologyBLASTP
45432644543839576putative transcriptional regulatorQuickGO ontologyBLASTP
454387645455791704thioldisulfide interchange protein precursorQuickGO ontologyBLASTP
45455554545902348periplasmic divalent cation tolerance protein CutAQuickGO ontologyBLASTP