Pre_GI: BLASTN Hits

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Query: NC_021182:338428 Clostridium pasteurianum BC1, complete genome

Start: 338428, End: 362406, Length: 23979

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome1e-94355BLASTN svgBLASTP svg
NC_012563:16816391681639170433322695Clostridium botulinum A2 str. Kyoto, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010674:23283072328307234841320107Clostridium botulinum B str. Eklund 17B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021182:27650002765000278427519276Clostridium pasteurianum BC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010723:22693722269372228916119790Clostridium botulinum E3 str. Alaska E43, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021182:33470763347076337313126056Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg