Pre_GI: BLASTP Hits

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Query: NC_018681:2985078:3000810 Nocardia brasiliensis ATCC 700358 chromosome, complete genome

Start: 3000810, End: 3001703, Length: 894

Host Lineage: Nocardia brasiliensis; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Location: Mexico; Host: Human. Mycetoma of the thorax with dissemination to the lungs.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013947:2113941:214394221439422144847906Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily1e-101369
NC_013729:2157785:215778521577852158747963Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-63243
NC_009953:3552738:355452635545263555413888Salinispora arenicola CNS-205 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-59229
NC_012988:4353000:435999343599934360955963Methylobacterium extorquens DM4, complete genomeRNA polymerase sigma factor8e-50197
NC_011963:1979136:199767119976711998531861Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceRNA polymerase sigma factor SigJ1e-47190
NC_016582:389729:408355408355409278924Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor8e-46184
NC_015312:1191633:120925612092561210143888Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-44179
NC_011891:4450031:447536544753654476306942Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-44179
NC_008061:2548849:255260425526042553491888Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-44179
NC_008543:2696377:271349727134972714384888Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-44179
NC_010515:1618093:162184016218401622727888Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily5e-44178
NC_007777:2964500:298966629896662990505840Frankia sp. CcI3, complete genomesigma-245e-43174
NC_013729:2813895:281389528138952814809915Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-41170
NC_013729:1556922:157591315759131576869957Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-41169
NC_016582:389729:400537400537401454918Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor2e-40166
NC_017904:2641270:266192226619222662830909Mycobacterium sp. MOTT36Y chromosome, complete genomeECF family RNA polymerase sigma factor5e-38158
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor4e-37155
NC_016109:3963189:396631339663133967236924Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor5e-37154
NC_013093:1411882:141263314126331413622990Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-35147
NC_009921:3384116:338747933874793388363885Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-34145
NC_014211:174694:178206178206179093888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidRNA polymerase, sigma-24 subunit, ECF subfamily5e-34145
NC_006361:498305:511298511298512179882Nocardia farcinica IFM 10152, complete genomeputative sigma factor8e-34144
NC_003888:6853107:686230768623076863275969Streptomyces coelicolor A3(2), complete genomesigma factor4e-33141
NC_013595:4031947:403803340380334038914882Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-31134
NC_009338:5161886:516373951637395164668930Mycobacterium gilvum PYR-GCK chromosome, complete genomeRNA polymerase sigma factor SigJ1e-30133
NC_016935:1365463:137867613786761379554879Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF family RNA polymerase sigma factor5e-30131
NC_015690:3941113:395186339518633952741879Paenibacillus mucilaginosus KNP414 chromosome, complete genomeECF family RNA polymerase sigma factor5e-30131
NC_002944:2373873:239794423979442398834891Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-27123
NC_020126:2216926:223261622326162233497882Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor4e-26118
NC_013947:1011899:103481410348141035695882Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily2e-25116
NC_013510:5394432:542642554264255427285861Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-23108
NC_012988:4353000:436675543667554367414660Methylobacterium extorquens DM4, complete genome8e-2097.8
NC_003888:7866148:788926678892667890168903Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma factor3e-1996.3
NC_016582:389729:399584399584400495912Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor1e-1893.6
NC_015656:381554:400378400378400803426Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-1789.7
NC_014666:5449884:545245454524545453449996Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-1270.9
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily4e-1168.9
NC_014666:4419693:4438717443871744400121296Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1168.2
NC_016935:4038265:405515440551544056110957Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1067.4
NC_013131:3473843:3473843347384334748471005Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1065.9
NC_017186:6817904:683778768377876838761975Amycolatopsis mediterranei S699 chromosome, complete genomeRNA polymerase factor sigma-706e-1065.1
NC_012914:5225609:523278752327875233743957Paenibacillus sp. JDR-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0964.3
NC_009953:3316782:3328358332835833294311074Salinispora arenicola CNS-205 chromosome, complete genomeRNA polymerase factor sigma-704e-0962.4
NC_014318:6817860:683774368377436838723981Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-0962.4
NC_013169:513327:539599539599540546948Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma-70 factor, TIGR02960 family6e-0961.6
NC_016109:327826:348659348659349585927Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor1e-0860.5
NC_013510:4319296:433794943379494338947999Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0860.1
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0654.3
NC_010162:9207000:9230543923054392315501008Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor3e-0652.8