Pre_GI: BLASTN Hits

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Query: NC_017219:391100 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Start: 391100, End: 409099, Length: 18000

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:2895511*2895511291828622776Actinosynnema mirum DSM 43827, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_018720:417500*41750043759920100Bifidobacterium asteroides PRL2011 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010816:1274702*1274702129873624035Bifidobacterium longum DJO10A, complete genome04819BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome5e-38167BLASTN svgBLASTP svg
NC_015635:81150081150083636724868Microlunatus phosphovorus NM-1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013421:13978411397841141728819448Pectobacterium wasabiae WPP163, complete genome8e-0660BLASTN svgBLASTP svg