Pre_GI: BLASTP Hits

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Query: NC_017218:178564:194295 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 194295, End: 195176, Length: 882

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015437:438538:4568434568434583301488Selenomonas sputigena ATCC 35185 chromosome, complete genomeputative transcriptional regulator8e-59227
NC_015436:1322087:1333234133323413346701437Spirochaeta coccoides DSM 17374 chromosome, complete genomeputative transcriptional regulator8e-34144
NC_014815:658893:6685076685076702941788Micromonospora sp. L5 chromosome, complete genometranscriptional regulator1e-31136
NC_009921:8717659:8724418872441887261661749Frankia sp. EAN1pec, complete genomeputative transcriptional regulator5e-30131
NC_002950:1571383:1604022160402216054611440Porphyromonas gingivalis W83, complete genomehypothetical protein1e-25117
NC_015571:801715:8150688150688165191452Porphyromonas gingivalis TDC60, complete genomehypothetical protein1e-24114
NC_019902:1863162:1868352186835218698451494Thioalkalivibrio nitratireducens DSM 14787, complete genomeATP-dependent DNA helicase2e-23110
NC_015676:1009298:1024766102476610262351470Methanosalsum zhilinae DSM 4017 chromosome, complete genomeputative transcriptional regulator1e-20100
NC_002950:1571383:158790315879031588520618Porphyromonas gingivalis W83, complete genomehypothetical protein2e-2099.4
NC_008639:1573971:1588824158882415903081485Chlorobium phaeobacteroides DSM 266, complete genomeputative transcriptional regulator4e-2098.6
NC_020304:2008740:200874020087402009627888Desulfocapsa sulfexigens DSM 10523, complete genomehypothetical protein5e-2098.6
NC_013204:74855:7749777497789001404Eggerthella lenta DSM 2243, complete genomeputative transcriptional regulator6e-2098.2
NC_004663:4273143:4275431427543142768881458Bacteroides thetaiotaomicron VPI-5482, complete genomeATP-dependent DNA helicase recG1e-1997.4
NC_015873:450593:4561264561264575801455Megasphaera elsdenii DSM 20460, complete genomepredicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen4e-1995.5
NC_010803:1573849:1572330157233015738561527Chlorobium limicola DSM 245, complete genomeputative transcriptional regulator2e-1893.2
NC_015635:4097711:4115606411560641170511446Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1893.2
NC_008782:3800500:3802582380258238038501269Acidovorax sp. JS42, complete genomeputative transcriptional regulator1e-1790.9
NC_007514:1475323:1488373148837314895811209Chlorobium chlorochromatii CaD3, complete genomeputative transcriptional regulator2e-1686.3
NC_012489:209016:2123302123302143271998Gemmatimonas aurantiaca T-27, complete genomehypothetical protein5e-1685.1
NC_008942:875060:876192876192877022831Methanocorpusculum labreanum Z, complete genomehypothetical protein9e-1684.3
NC_015167:2663686:2676821267682126782241404Cellulophaga lytica DSM 7489 chromosome, complete genomeArsR family transcriptional regulator2e-1583.2
NC_007404:2743877:2756352275635227582561905Thiobacillus denitrificans ATCC 25259, complete genomePredicted transcriptional regulator2e-1583.2
NC_013192:232778:2366962366962381591464Leptotrichia buccalis DSM 1135, complete genomeputative transcriptional regulator3e-1582.8
NC_012804:903539:9189099189099204051497Thermococcus gammatolerans EJ3, complete genomeTranscription regulator, HTH/deoR family4e-1582.4
NC_008782:2683989:2689533268953326907081176Acidovorax sp. JS42, complete genomeputative transcriptional regulator4e-1582
NC_015387:1091403:1097493109749310988991407Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative transcriptional regulator4e-1582
NC_016610:1310275:1338268133826813397311464Tannerella forsythia ATCC 43037 chromosome, complete genomedivergent AAA domain-containing protein9e-1580.9
NC_016051:241438:2647172647172660571341Thermococcus sp. AM4 chromosome, complete genomeATP-dependent DNA helicase2e-1480.1
NC_014394:942015:9428179428179443131497Gallionella capsiferriformans ES-2 chromosome, complete genomeputative transcriptional regulator3e-1479.3
NC_015977:2807782:2823521282352128249361416Roseburia hominis A2-183 chromosome, complete genomeputative transcriptional regulator3e-1479.3
NC_008578:889907:9001829001829015851404Acidothermus cellulolyticus 11B, complete genomeputative transcriptional regulator5e-1478.6
NC_013722:1816561:1850985185098518521601176Xanthomonas albilineans, complete genomeputative atp-dependent dna helicase protein7e-1478.2
NC_013530:3204825:3208470320847032102781809Xylanimonas cellulosilytica DSM 15894, complete genomeputative transcriptional regulator1e-1377.4
NC_018691:3437821:3445765344576534473001536Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein1e-1377
NC_013851:3142182:3154890315489031561341245Allochromatium vinosum DSM 180 chromosome, complete genomeputative transcriptional regulator2e-1376.6
NC_010995:4338860:4354146435414643556061461Cellvibrio japonicus Ueda107, complete genomeATP-dependent DNA helicase3e-1376.3
NC_009767:2051203:2069909206990920710691161Roseiflexus castenholzii DSM 13941, complete genomeputative transcriptional regulator4e-1375.5
NC_015873:924392:9569229569229584361515Megasphaera elsdenii DSM 20460, complete genomehypothetical protein5e-1375.1
NC_014033:1215790:1237105123710512385381434Prevotella ruminicola 23 chromosome, complete genomedivergent AAA domain-containing protein1e-1274.3
NC_007005:5825925:584072758407275841323597Pseudomonas syringae pv. syringae B728a, complete genomeATP-dependent DNA helicase recG1e-1273.9
NC_015977:935798:950682950682951569888Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-1273.6
NC_015873:924392:964272964272965096825Megasphaera elsdenii DSM 20460, complete genomehypothetical protein3e-1272.8
NC_015216:1102837:1124530112453011258881359Methanobacterium sp. AL-21 chromosome, complete genomeputative transcriptional regulator3e-1272.8
NC_014033:1152994:1174275117427511756961422Prevotella ruminicola 23 chromosome, complete genomedivergent AAA domain-containing protein3e-1272.8
NC_013721:533048:545778545778546722945Gardnerella vaginalis 409-05, complete genomehypothetical protein4e-1272.4
NC_010655:373437:3876163876163889831368Akkermansia muciniphila ATCC BAA-835, complete genomeputative transcriptional regulator4e-1272
NC_014218:4424:1137311373131091737Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeputative transcriptional regulator5e-1272
NC_019977:302454:3112663112663126121347Methanomethylovorans hollandica DSM 15978, complete genomeputative transcriptional regulator with HTH domain6e-1271.6
NC_014614:356746:3567463567463580441299Clostridium sticklandii, complete genomehypothetical protein8e-1271.2
NC_010688:605018:6154626154626167781317Xanthomonas campestris pv. campestris, complete genomeputative DNA-binding protein1e-1170.9
NC_007086:626891:6373356373356386511317Xanthomonas campestris pv. campestris str. 8004, complete genomeATP-dependent DNA helicase1e-1170.9
NC_003902:624828:6352726352726365881317Xanthomonas campestris pv. campestris str. ATCC 33913, completeATP-dependent DNA helicase1e-1170.9
NC_002163:1471517:1485626148562614870921467Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein3e-1169.7
NC_015501:1941851:1956323195632319577621440Porphyromonas asaccharolytica DSM 20707 chromosome, completeputative transcriptional regulator3e-1169.3
NC_013410:1152188:1167781116778111693191539Fibrobacter succinogenes subsp. succinogenes S85 chromosome,transcriptional regulator7e-1168.2
NC_013410:2519441:2546831254683125483061476Fibrobacter succinogenes subsp. succinogenes S85 chromosome,transcriptional regulator8e-1167.8
NC_008054:245184:263819263819264784966Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative transcriptional regulator (Crp family)1e-1067.4
NC_010645:406794:4125234125234140011479Bordetella avium 197N, complete genomehypothetical protein1e-1067.4
NC_015703:4933430:4968265496826549697251461Runella slithyformis DSM 19594 chromosome, complete genomeputative transcriptional regulator2e-1067
NC_014246:1991093:2003133200313320045751443Mobiluncus curtisii ATCC 43063 chromosome, complete genometranscriptional regulator2e-1067
NC_007413:1405817:1415938141593814180012064Anabaena variabilis ATCC 29413, complete genomePredicted transcriptional regulator2e-1066.6
NC_009483:3173464:3173464317346431751491686Geobacter uraniireducens Rf4 chromosome, complete genomeputative transcriptional regulator2e-1066.2
NC_009254:74000:824418244183328888Burkholderia vietnamiensis G4 chromosome 3, complete sequencetranscriptional regulator4e-1065.9
NC_009515:510121:5140905140905155441455Methanobrevibacter smithii ATCC 35061, complete genometranscriptional regulator4e-1065.5
NC_013721:820852:831739831739832707969Gardnerella vaginalis 409-05, complete genomehypothetical protein6e-1065.1
NC_016626:1751159:1770488177048817719511464Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein1e-0964.3
NC_017187:10320:2958029580310401461Arcobacter butzleri ED-1, complete genomehypothetical protein1e-0963.9
NC_015510:6373937:6381529638152963826921164Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeputative transcriptional regulator2e-0963.2
NC_017342:1012555:1038341103834110397771437Staphylococcus aureus subsp. aureus TCH60 chromosome, completedivergent AAA domain-containing protein3e-0962.8
NC_007514:904565:936305936305937204900Chlorobium chlorochromatii CaD3, complete genomeputative transcriptional regulator4e-0962.4
NC_008702:1:7453745389101458Azoarcus sp. BH72, complete genomeputative restriction modification gene4e-0962.4
NC_007514:904565:9303709303709315271158Chlorobium chlorochromatii CaD3, complete genomeputative transcriptional regulator5e-0962
NC_007404:1126756:1136104113610411374501347Thiobacillus denitrificans ATCC 25259, complete genomePredicted transcriptional regulator7e-0961.6
NC_016943:2054688:2065953206595320671281176Blastococcus saxobsidens DD2, complete genomeputative transcriptional regulator9e-0961.2
NC_017215:22616:218492184922691843Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides1e-0860.5
NC_017216:22454:216872168722529843Bifidobacterium animalis subsp. lactis BLC1, complete genomeputative transcriptional regulator1e-0860.5
NC_017047:3174588:3188621318862131900121392Rahnella aquatilis HX2 chromosome, complete genometranscriptional regulator2e-0859.7
NC_015061:3111211:3124019312401931254101392Rahnella sp. Y9602 chromosome, complete genometranscriptional regulator2e-0859.7
NC_018721:3155579:3154092315409231555821491Psychroflexus torquis ATCC 700755 chromosome, complete genomeATP binding protein with AAA and HATPase domains3e-0859.7
NC_008782:3800500:3810915381091538128011887Acidovorax sp. JS42, complete genomeputative transcriptional regulator5e-0858.5
NC_004757:2730057:2759505275950527613911887Nitrosomonas europaea ATCC 19718, complete genomepossible ATP-dependent DNA helicase RecG-related protein5e-0858.5
NC_016610:726128:7499917499917511121122Tannerella forsythia ATCC 43037 chromosome, complete genome5e-0858.5
NC_016745:1257397:1267614126761412690021389Oceanimonas sp. GK1 chromosome, complete genomeputative transcriptional regulator8e-0857.8
NC_015311:403281:4259074259074273641458Prevotella denticola F0289 chromosome, complete genomedivergent AAA domain-containing protein9e-0857.8
NC_011832:913994:9406669406669421681503Candidatus Methanosphaerula palustris E1-9c, complete genomeputative transcriptional regulator1e-0757.4
NC_014562:2871765:2881811288181128832171407Pantoea vagans C9-1 chromosome, complete genomehypothetical protein1e-0757
NC_014638:148527:1539611539611556461686Bifidobacterium bifidum PRL2010 chromosome, complete genomeDNA-binding protein1e-0757
NC_014638:183115:1982581982581998801623Bifidobacterium bifidum PRL2010 chromosome, complete genomeDNA-binding protein2e-0756.6
NC_016609:5890292:5930616593061659319801365Niastella koreensis GR20-10 chromosome, complete genomeputative transcriptional regulator2e-0756.6
NC_015578:1430112:144686714468671447295429Treponema primitia ZAS-2 chromosome, complete genomedivergent AAA ATPase3e-0756.2
NC_011894:2503639:2508611250861125100291419Methylobacterium nodulans ORS 2060, complete genomeputative transcriptional regulator4e-0755.5
NC_016043:1563505:1567437156743715688881452Taylorella asinigenitalis MCE3 chromosome, complete genomeATP-dependent DNA helicase recG5e-0755.5
NC_019977:1353332:1362774136277413641291356Methanomethylovorans hollandica DSM 15978, complete genomeputative transcriptional regulator with HTH domain6e-0755.1
NC_011593:53044:5692856928585771650Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transcriptional regulator8e-0754.7
NC_009092:1305355:1317630131763013190181389Shewanella loihica PV-4, complete genomeputative transcriptional regulator8e-0754.7
NC_017219:51563:5671356713583681656Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator9e-0754.3
NC_017218:31247:4576845768474231656Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomedivergent AAA domain-containing protein9e-0754.3
NC_011832:619874:6332876332876346571371Candidatus Methanosphaerula palustris E1-9c, complete genomeputative transcriptional regulator1e-0654.3
NC_015067:32500:3834238342399911650Bifidobacterium longum subsp. longum JCM 1217, complete genometranscriptional regulator1e-0654.3
NC_006461:953817:9646959646959660501356Thermus thermophilus HB8, complete genomehypothetical protein1e-0653.9
NC_019902:1863162:1870066187006618713071242Thioalkalivibrio nitratireducens DSM 14787, complete genomeATP-dependent DNA helicase-like protein2e-0653.5
NC_015577:1794560:1822146182214618233241179Treponema azotonutricium ZAS-9 chromosome, complete genomeATP-dependent DNA helicase2e-0653.5
NC_008639:2968000:2983953298395329853621410Chlorobium phaeobacteroides DSM 266, complete genomeputative transcriptional regulator2e-0653.5
NC_015437:816719:8290348290348305061473Selenomonas sputigena ATCC 35185 chromosome, complete genomeputative transcriptional regulator2e-0653.5
NC_014033:164670:1778321778321793941563Prevotella ruminicola 23 chromosome, complete genomedivergent AAA domain-containing protein2e-0653.1
NC_014614:1166009:1188968118896811902751308Clostridium sticklandii, complete genomehypothetical protein3e-0653.1
NC_005773:106000:1204131204131218821470Pseudomonas syringae pv. phaseolicola 1448A, complete genomecarbon storage regulator related protein5e-0652