Pre_GI: BLASTN Hits

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Query: NC_016909:100000 Rickettsia rickettsii str. Arizona chromosome, complete genome

Start: 100000, End: 122099, Length: 22100

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. This organism was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010263:100000*10000012209922100Rickettsia rickettsii str. Iowa, complete genome09228BLASTN svgBLASTP svg
NC_009882:100000*10000012209922100Rickettsia rickettsii str. 'Sheila Smith', complete genome09212BLASTN svgBLASTP svg
NC_012633:98000*9800012009922100Rickettsia africae ESF-5, complete genome08554BLASTN svgBLASTP svg
NC_009881:92929*9292911990326975Rickettsia akari str. Hartford, complete genome03511BLASTN svgBLASTP svg
NC_000963:83408*8340810609922692Rickettsia prowazekii str. Madrid E, complete genome02555BLASTN svgBLASTP svg
NC_006142:57571*575718059923029Rickettsia typhi str. Wilmington, complete genome02323BLASTN svgBLASTP svg
NC_009883:140890*14089016003119142Rickettsia bellii OSU 85-389, complete genome9e-68266BLASTN svgBLASTP svg
NC_007940:1435701*1435701145874023040Rickettsia bellii RML369-C, complete genome9e-68266BLASTN svgBLASTP svg
NC_007109:13350371335037135749822462Rickettsia felis URRWXCal2, complete genome2e-38168BLASTN svgBLASTP svg
NC_009900:12200821220082123809918018Rickettsia massiliae MTU5, complete genome9e-31143BLASTN svgBLASTP svg
NC_009882:11237091123709114614722439Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-28135BLASTN svgBLASTP svg
NC_003103:11338061133806115644922644Rickettsia conorii str. Malish 7, complete genome2e-28135BLASTN svgBLASTP svg
NC_016050:1149000*1149000117209923100Rickettsia japonica YH, complete genome5e-26127BLASTN svgBLASTP svg
NC_015866:1144958*1144958116861223655Rickettsia heilongjiangensis 054 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_012730:652092*65209267059918508Rickettsia peacockii str. Rustic, complete genome8e-25123BLASTN svgBLASTP svg
NC_012633:1145500*1145500116442718928Rickettsia africae ESF-5, complete genome1e-20109BLASTN svgBLASTP svg
NC_003103:563961*56396158206318103Rickettsia conorii str. Malish 7, complete genome1e-20109BLASTN svgBLASTP svg
NC_010263:11359321135932115460218671Rickettsia rickettsii str. Iowa, complete genome2e-19105BLASTN svgBLASTP svg
NC_010263:563814*56381458651822705Rickettsia rickettsii str. Iowa, complete genome3e-18101BLASTN svgBLASTP svg
NC_009882:563830*56383058653522706Rickettsia rickettsii str. 'Sheila Smith', complete genome3e-18101BLASTN svgBLASTP svg
NC_009900:180970*18097020133120362Rickettsia massiliae MTU5, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_016050:182218*18221820254820331Rickettsia japonica YH, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012730:131445*13144515343621992Rickettsia peacockii str. Rustic, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007109:80833180833182664718317Rickettsia felis URRWXCal2, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007109:11052511105251112857523325Rickettsia felis URRWXCal2, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_016050:771752*77175279719725446Rickettsia japonica YH, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010001:3266561*3266561328620519645Clostridium phytofermentans ISDg, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015866:767790*76779079562627837Rickettsia heilongjiangensis 054 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010263:771901*77190179080218902Rickettsia rickettsii str. Iowa, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004061:237205*23720526067723473Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010465:3431500*3431500345664825149Yersinia pseudotuberculosis YPIII, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003103:266013*26601328459918587Rickettsia conorii str. Malish 7, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007109:89400089400091609922100Rickettsia felis URRWXCal2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012730:293634*29363431769424061Rickettsia peacockii str. Rustic, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015144:734726*73472676451229787Weeksella virosa DSM 16922 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015866:274550*27455029923324684Rickettsia heilongjiangensis 054 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016050:23600023600025587419875Rickettsia japonica YH, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016050:938000*93800095659918600Rickettsia japonica YH, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003909:3606177*3606177364959943423Bacillus cereus ATCC 10987, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003997:3617000*3617000367460757608Bacillus anthracis str. Ames, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005945:3636321*3636321368007243752Bacillus anthracis str. Sterne, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006274:3697255*3697255372593028676Bacillus cereus E33L, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007530:3616828*3616828367637859551Bacillus anthracis str. 'Ames Ancestor', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007940:1485006*1485006151623031225Rickettsia bellii RML369-C, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009882:915500*91550094186526366Rickettsia rickettsii str. 'Sheila Smith', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009883:1492425*1492425152313430710Rickettsia bellii OSU 85-389, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010263:925500*92550094361318114Rickettsia rickettsii str. Iowa, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011772:3787500*3787500381637528876Bacillus cereus G9842, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014335:3589726*3589726362559935874Bacillus cereus biovar anthracis str. CI chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_015866:933500*93350096409930600Rickettsia heilongjiangensis 054 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009662:222964*22296426489641933Nitratiruptor sp. SB155-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009881:724269*72426974466620398Rickettsia akari str. Hartford, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015856:1271295*1271295129109919805Collimonas fungivorans Ter331 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003103:22595622595624833922384Rickettsia conorii str. Malish 7, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012633:12000*120003409922100Rickettsia africae ESF-5, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012730:33250033250035137618877Rickettsia peacockii str. Rustic, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013061:987744*987744100953721794Pedobacter heparinus DSM 2366, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014759:3572500*3572500360200929510Marivirga tractuosa DSM 4126 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015866:14071*140713274218672Rickettsia heilongjiangensis 054 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015866:23344823344825473021283Rickettsia heilongjiangensis 054 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_016050:15224152243358318360Rickettsia japonica YH, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018681:441014*44101447306232049Nocardia brasiliensis ATCC 700358 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020195:172229*17222919509922871Blattabacterium sp. (Blatta orientalis) str. Tarazona, complete7e-0763.9BLASTN svgBLASTP svg
NC_009882:13826*138263610122276Rickettsia rickettsii str. 'Sheila Smith', complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009882:23240023240025009917700Rickettsia rickettsii str. 'Sheila Smith', complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010263:13826*138263609922274Rickettsia rickettsii str. Iowa, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010263:23248223248225109918618Rickettsia rickettsii str. Iowa, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_016026:29695129695132039423444Micavibrio aeruginosavorus ARL-13 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009881:283500*28350030114817649Rickettsia akari str. Hartford, complete genome3e-0661.9BLASTN svgBLASTP svg