Pre_GI: BLASTP Hits

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Query: NC_016863:1277652:1288997 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1

Start: 1288997, End: 1289209, Length: 213

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:1317174:132851913285191328731213Salmonella enterica subsp. enterica serovar Typhimurium strcold shock protein4e-35146
NC_010102:1779707:179118217911821791394213Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-35146
NC_003197:1320861:133083213308321331044213Salmonella typhimurium LT2, complete genomecold shock-like protein4e-35146
NC_004631:1182883:119798611979861198198213Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative cold shock protein4e-35146
NC_003198:1771432:178293417829341783146213Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative cold shock protein4e-35146
NC_011294:1896168:190764319076431907855213Salmonella enterica subsp. enterica serovar Enteritidis strcold shock protein CspH4e-35146
NC_016810:1276340:128768512876851287897213Salmonella enterica subsp. enterica serovar Typhimurium strcold shock protein (CspH)4e-35146
NC_016856:1326503:134080713408071341019213Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scold shock-like protein4e-35146
NC_016857:1276340:128768512876851287897213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cold shock protein4e-35146
NC_012125:2531817:254329325432932543505213Salmonella enterica subsp. enterica serovar Paratyphi C straincold shock protein5e-34142
NC_006905:1342474:136246613624661362678213Salmonella enterica subsp. enterica serovar Choleraesuis strcold shock protein-like protein5e-34142
NC_006511:1654959:166560016656001665812213Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cold shock protein1e-33141
NC_011147:1650142:166078316607831660995213Salmonella enterica subsp. enterica serovar Paratyphi A strcold shock protein1e-33141
NC_011094:1282385:129748912974891297701213Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-33140
NC_015761:1181186:120922312092231209435213Salmonella bongori NCTC 12419, complete genomecold shock protein7e-31132
CP002516:2305659:232379423237942324006213Escherichia coli KO11, complete genomecold-shock DNA-binding domain protein2e-25114
CU928160:1668842:167987816798781680090213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage2e-25114
NC_011740:4520373:452586145258614526073213Escherichia fergusonii ATCC 35469, complete genomecold shock protein; Qin prophage2e-25114
AC_000091:1627049:164356916435691643781213Escherichia coli W3110 DNA, complete genomecold shock protein2e-25114
NC_011750:1565000:157106915710691571281213Escherichia coli IAI39 chromosome, complete genomecold shock protein; Qin prophage2e-25114
NC_011751:1859606:187177118717711871983213Escherichia coli UMN026 chromosome, complete genomecold shock protein; Qin prophage2e-25114
NC_010473:1712984:172950417295041729716213Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; cold shock protein2e-25114
NC_004431:3040953:305264930526493052861213Escherichia coli CFT073, complete genomeCold shock-like protein cspF2e-25114
CP002185:1770815:178185017818501782062213Escherichia coli W, complete genomeQin prophage; cold shock protein2e-25114
NC_000913:1625500:163987916398791640091213Escherichia coli K12, complete genomeQin prophage; cold shock protein2e-25114
NC_011741:1668842:167987816798781680090213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage2e-25114
NC_011742:4962008:496839449683944968606213Escherichia coli S88 chromosome, complete genomecold shock protein; Qin prophage2e-25114
NC_012759:1517500:153193815319381532150213Escherichia coli BW2952 chromosome, complete genomeQin prophage; cold shock protein2e-25114
NC_013361:2138716:215092921509292151141213Escherichia coli O26:H11 str. 11368 chromosome, complete genomecold shock protein2e-25114
NC_016902:2305659:232379423237942324006213Escherichia coli KO11FL chromosome, complete genomecold-shock protein2e-25114
NC_013941:5317424:532338853233885323600213Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecold-shock protein3e-25113
NC_016612:477407:486391486391486603213Klebsiella oxytoca KCTC 1686 chromosome, complete genomecold shock-like protein CspF4e-25113
NC_015663:4488058:449704244970424497254213Enterobacter aerogenes KCTC 2190 chromosome, complete genomecold shock-like protein CspF1e-24111
NC_010468:2265423:228073722807372280937201Escherichia coli ATCC 8739, complete genomecold-shock DNA-binding domain protein2e-23107
NC_009436:2685910:269487826948782695090213Enterobacter sp. 638, complete genomecold-shock DNA-binding protein family protein8e-1475.9
NC_013421:2306000:231836723183672318579213Pectobacterium wasabiae WPP163, complete genomecold-shock DNA-binding domain protein4e-1373.2
NC_009832:4269804:427489642748964275108213Serratia proteamaculans 568, complete genomecold-shock DNA-binding domain protein5e-1373.2
NC_009381:1783886:181188818118881812100213Yersinia pestis Pestoides F chromosome, complete genomecold shock protein3e-1270.5
NC_016816:4232680:424978342497834249995213Pantoea ananatis LMG 5342, complete genomecold shock-like protein3e-1270.5
NC_015566:4350080:435925543592554359467213Serratia sp. AS12 chromosome, complete genomecold-shock DNA-binding domain-containing protein3e-1270.9
NC_012912:242709:264877264877265089213Dickeya zeae Ech1591, complete genomecold-shock DNA-binding domain protein1e-1168.2
CU928160:1668842:167936216793621679577216Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage1e-1168.6
NC_011751:1859606:187125518712551871470216Escherichia coli UMN026 chromosome, complete genomecold shock protein; Qin prophage1e-1168.6
NC_000913:1625500:163936316393631639578216Escherichia coli K12, complete genomeQin prophage; cold shock protein1e-1168.6
NC_010473:1712984:172898817289881729203216Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; cold shock protein1e-1168.6
AC_000091:1627049:164305316430531643268216Escherichia coli W3110 DNA, complete genomecold shock protein1e-1168.6
CP002185:1770815:178133417813341781549216Escherichia coli W, complete genomeQin prophage; cold shock protein1e-1168.6
CP002516:2305659:232430723243072324522216Escherichia coli KO11, complete genomecold-shock DNA-binding domain protein1e-1168.6
NC_010468:2265423:228125022812502281465216Escherichia coli ATCC 8739, complete genomecold-shock DNA-binding domain protein1e-1168.6
NC_011750:1565000:157158215715821571797216Escherichia coli IAI39 chromosome, complete genomecold shock protein; Qin prophage1e-1168.6
NC_013941:5317424:532390153239015324116216Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecold-shock protein1e-1168.6
NC_011742:4962008:496890749689074969122216Escherichia coli S88 chromosome, complete genomecold shock protein; Qin prophage1e-1168.6
NC_004431:3040953:305213330521333052348216Escherichia coli CFT073, complete genomeCold shock-like protein cspB1e-1168.6
NC_011740:4520373:452637645263764526591216Escherichia fergusonii ATCC 35469, complete genomecold shock protein; Qin prophage1e-1168.6
NC_016902:2305659:232430723243072324522216Escherichia coli KO11FL chromosome, complete genomecold-shock protein1e-1168.6
NC_012759:1517500:153142215314221531637216Escherichia coli BW2952 chromosome, complete genomeQin prophage; cold shock protein1e-1168.6
NC_011741:1668842:167936216793621679577216Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage1e-1168.6
NC_013361:2138716:215041321504132150628216Escherichia coli O26:H11 str. 11368 chromosome, complete genomecold shock protein2e-1167.4
NC_006905:3780000:378721937872193787431213Salmonella enterica subsp. enterica serovar Choleraesuis strCold shock protein cspA (CSP-A)2e-1167.8
NC_004337:3590323:369111436911143691326213Shigella flexneri 2a str. 301, complete genomecold shock protein 7.4, transcriptional activator of hns2e-1167.8
NC_008258:3581583:360014336001433600355213Shigella flexneri 5 str. 8401, complete genomeCold shock protein cspA2e-1167.8
NC_011601:3951324:397393139739313974143213Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomemajor cold shock protein2e-1167.8
NC_014306:4901390:492860049286004928812213Erwinia billingiae Eb661, complete genomeCold-shock DNA-binding domain protein2e-1167.8
NC_009801:1756610:176239117623911762606216Escherichia coli E24377A, complete genomecold shock DNA-binding protein4e-1166.6
NC_013941:5317424:532716753271675327379213Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecold-shock protein5e-1166.6
CP002185:1770815:177845017784501778662213Escherichia coli W, complete genomeQin prophage; cold shock protein6e-1166.2
CP002516:2305659:232719423271942327406213Escherichia coli KO11, complete genomecold-shock DNA-binding domain protein6e-1166.2
CU928160:1668842:167647716764771676689213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage6e-1166.2
NC_011740:4520373:452982845298284530040213Escherichia fergusonii ATCC 35469, complete genomecold shock protein; Qin prophage6e-1166.2
NC_011751:1859606:186837018683701868582213Escherichia coli UMN026 chromosome, complete genomecold shock protein; Qin prophage6e-1166.2
AC_000091:1627049:164016916401691640381213Escherichia coli W3110 DNA, complete genomecold shock protein6e-1166.2
NC_009800:1657550:166751416675141667729216Escherichia coli HS, complete genomecold shock DNA-binding protein6e-1166.2
NC_004431:3040953:304868330486833048898216Escherichia coli CFT073, complete genomeCold shock-like protein cspI6e-1166.2
NC_000913:1625500:163647916364791636691213Escherichia coli K12, complete genomeQin prophage; cold shock protein6e-1166.2
NC_011750:1565000:157446915744691574681213Escherichia coli IAI39 chromosome, complete genomecold shock protein; Qin prophage6e-1166.2
NC_016902:2305659:232719423271942327406213Escherichia coli KO11FL chromosome, complete genomecold-shock protein6e-1166.2
NC_013361:2138716:214752921475292147741213Escherichia coli O26:H11 str. 11368 chromosome, complete genomecold shock protein6e-1166.2
NC_012967:1593101:161064816106481610860213Escherichia coli B str. REL606 chromosome, complete genomecold shock protein6e-1166.2
NC_012759:1517500:152853815285381528750213Escherichia coli BW2952 chromosome, complete genomeQin prophage; cold shock protein6e-1166.2
NC_011742:4962008:497235949723594972571213Escherichia coli S88 chromosome, complete genomecold shock protein; Qin prophage6e-1166.2
NC_011741:1668842:167647716764771676689213Escherichia coli IAI1 chromosome, complete genomecold shock protein; Qin prophage6e-1166.2
NC_010473:1712984:172610417261041726316213Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; cold shock protein6e-1166.2
NC_010468:2265423:228413722841372284349213Escherichia coli ATCC 8739, complete genomecold-shock DNA-binding domain protein6e-1166.2
NC_004088:1291754:131314113131411313395255Yersinia pestis KIM, complete genomecold shock protein E1e-1065.1
NC_013282:1842412:186615718661571866369213Cronobacter turicensis, complete genomeCold shock-like protein cspB1e-1065.5
NC_005810:1976000:198003719800371980249213Yersinia pestis biovar Microtus str. 91001, complete genomecold shock protein1e-1065.5
NC_003143:1880000:188377318837731883985213Yersinia pestis CO92, complete genomecold shock protein1e-1065.5
NC_009381:2009842:202597220259722026184213Yersinia pestis Pestoides F chromosome, complete genomecold shock protein1e-1065.5
NC_017265:1715035:172019317201931720405213Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,cold shock protein1e-1065.5
NC_020418:2084937:209106620910662091278213Morganella morganii subsp. morganii KT, complete genomecold shock protein E2e-1064.3
NC_004631:948054:983453983453983665213Salmonella enterica subsp. enterica serovar Typhi Ty2, completecold shock protein2e-1064.7
NC_016832:948029:981128981128981340213Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cold shock-like protein cspJ2e-1064.7
NC_008150:2785830:279363527936352793844210Yersinia pestis Antiqua, complete genomeputative cold shock protein2e-1064.7
NC_003143:2895617:291705429170542917263210Yersinia pestis CO92, complete genomecold shock protein E2e-1064.7
NC_011205:1227373:123964812396481239860213Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cold-shock protein3e-1063.9
NC_011274:1129686:115301911530191153231213Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cold shock protein3e-1063.9
NC_016810:2027311:203679320367932037005213Salmonella enterica subsp. enterica serovar Typhimurium strcold shock protein3e-1063.9
NC_016831:1865681:187193418719341872146213Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcold shock protein3e-1063.9
NC_016856:2085283:209063020906302090842213Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cold-shock protein3e-1063.9
NC_016857:2027311:203679320367932037005213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cold-shock protein3e-1063.9
NC_016863:2029340:203882220388222039034213Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cold-shock protein3e-1063.9
NC_017046:2026672:203615420361542036366213Salmonella enterica subsp. enterica serovar Typhimurium str. 798cold shock protein3e-1063.9
NC_012751:1190206:119321011932101193428219Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA chaperone, transcription antiterminator, affects expression of rpoS and uspA5e-1063.2
NC_020064:1150982:116604211660421166251210Serratia marcescens FGI94, complete genomecold shock protein7e-1062.8
NC_015224:1440283:145498914549891455198210Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,cold shock protein CspE9e-1062.4
NC_008800:3279468:328277832827783282987210Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cold shock protein CspE9e-1062.4
NC_011149:1110642:112583411258341126046213Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0962
NC_015663:4488058:449753344975334497751219Enterobacter aerogenes KCTC 2190 chromosome, complete genomecold-shock' DNA-binding domain-containing protein1e-0961.6
NC_008513:343540:349218349218349427210Buchnera aphidicola str. Cc (Cinara cedri), complete genomeCspE3e-0960.5
NC_011283:4966471:499118349911834991401219Klebsiella pneumoniae 342 chromosome, complete genomecold-shock DNA-binding protein4e-0960.1
NC_004545:499709:507389507389507598210Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomecold shock protein E4e-0960.5
NC_016612:477407:486882486882487100219Klebsiella oxytoca KCTC 1686 chromosome, complete genome'cold-shock' DNA-binding domain protein6e-0959.7
NC_009436:2685910:269332626933262693544219Enterobacter sp. 638, complete genomecold-shock DNA-binding protein family protein6e-0959.7
NC_020064:2779864:278063427806342780843210Serratia marcescens FGI94, complete genomecold shock protein1e-0858.5
NC_003143:1973867:198948919894891989698210Yersinia pestis CO92, complete genomecold shock protein1e-0858.5
NC_015061:3147691:315346531534653153674210Rahnella sp. Y9602 chromosome, complete genomecold-shock DNA-binding domain protein1e-0858.5
NC_008800:1942000:195654119565411956750210Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cold shock-like protein CspC1e-0858.5
NC_016818:3148000:315400131540013154210210Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completecold shock protein1e-0858.5
NC_017047:3212000:321806732180673218276210Rahnella aquatilis HX2 chromosome, complete genomecold shock-like protein CspC1e-0858.5
NC_008149:2652825:266034426603442660553210Yersinia pestis Nepal516, complete genomecold shock protein1e-0858.5
NC_012880:2399205:240646524064652406674210Dickeya dadantii Ech703, complete genomecold-shock DNA-binding domain protein3e-0857
NC_014335:4848389:486162248616224861825204Bacillus cereus biovar anthracis str. CI chromosome, completecold shock protein5e-0856.2
NC_003997:4876415:491200449120044912201198Bacillus anthracis str. Ames, complete genomecold shock protein CspC9e-0855.5
NC_007530:4877500:491213049121304912327198Bacillus anthracis str. 'Ames Ancestor', complete genomecold shock protein cspc9e-0855.5
NC_011772:5021404:505323450532345053431198Bacillus cereus G9842, complete genomecold shock protein CspC9e-0855.5
NC_011725:5075285:510678951067895106986198Bacillus cereus B4264 chromosome, complete genomecold shock protein CspC9e-0855.5
NC_012581:4882525:491445349144534914650198Bacillus anthracis str. CDC 684 chromosome, complete genomecold shock protein CspC9e-0855.5
NC_005945:4898841:491334149133414913544204Bacillus anthracis str. Sterne, complete genomecold shock protein CspC9e-0855.8
NC_006274:4940922:497311349731134973316204Bacillus cereus E33L, complete genomecold shock protein9e-0855.8
NC_005957:4904000:491678949167894916992204Bacillus thuringiensis serovar konkukian str. 97-27, completecold shock protein9e-0855.8
NC_012472:4908245:493871749387174938920204Bacillus cereus 03BB102, complete genomecold shock protein CspC9e-0855.8
NC_017208:5143500:515639251563925156595204Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecold shock protein9e-0855.8
NC_016779:4864056:489345048934504893653204Bacillus cereus F837/76 chromosome, complete genomeCold shock protein CspC9e-0855.8
NC_014171:4959248:499635749963574996560204Bacillus thuringiensis BMB171 chromosome, complete genomecold shock protein9e-0855.8
NC_012659:4877410:491203049120304912233204Bacillus anthracis str. A0248, complete genomecold shock protein CspC9e-0855.8
NC_011773:4940921:497332349733234973526204Bacillus cereus AH820 chromosome, complete genomecold shock protein CspC9e-0855.8
NC_008600:4898000:492845149284514928654204Bacillus thuringiensis str. Al Hakam, complete genomecold shock protein9e-0855.8
NC_010184:4909183:494509349450934945296204Bacillus weihenstephanensis KBAB4, complete genomecold-shock DNA-binding domain protein9e-0855.8
NC_003909:4854379:488506148850614885264204Bacillus cereus ATCC 10987, complete genomecold shock protein CspC1e-0755.1
NC_011658:4925346:493807849380784938281204Bacillus cereus AH187 chromosome, complete genomecold shock protein CspC1e-0755.1
NC_011969:4841358:487288948728894873092204Bacillus cereus Q1 chromosome, complete genomecold shock protein cspc1e-0755.1
NC_016771:4882886:489040148904014890604204Bacillus cereus NC7401, complete genomecold shock protein CspA1e-0755.1
NC_017200:4995075:503190950319095032112204Bacillus thuringiensis serovar finitimus YBT-020 chromosome,cold shock protein CspC1e-0755.1
NC_013061:2247191:224812622481262248332207Pedobacter heparinus DSM 2366, complete genomeCold-shock protein DNA-binding2e-0754.3
NC_015723:2116090:212798221279822128185204Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein3e-0753.9