Pre_GI: BLASTN Hits

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Query: NC_016830:4010637 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4010637, End: 4049599, Length: 38963

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008340:1241300*1241300125980118502Alkalilimnicola ehrlichei MLHE-1, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_006513:286549*28654931309926551Azoarcus sp. EbN1, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_007509:832473*83247385564123169Burkholderia sp. 383 chromosome 3, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_007645:34786303478630350293024301Hahella chejuensis KCTC 2396, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_008344:811386*81138684559634211Nitrosomonas eutropha C91, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,015210BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome7e-0867.9BLASTN svgBLASTP svg