Pre_GI: BLASTP Hits

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Query: NC_016768:1769332:1776640 Mycobacterium tuberculosis KZN 4207 chromosome, complete genome

Start: 1776640, End: 1778508, Length: 1869

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012943:1769445:1776753177675317786211869Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein2e-62240
NC_009525:2635792:2646496264649626475601065Mycobacterium tuberculosis H37Ra, complete genomePPE family protein7e-62238
NC_015848:2684275:2693696269369626955191824Mycobacterium canettii CIPT 140010059, complete genomeppe family protein2e-61237
NC_010612:4501414:4511619451161945135291911Mycobacterium marinum M, complete genomePPE family protein3e-45183
NC_012207:2573562:2595923259592325973291407Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein3e-36153
NC_012943:1769445:1774168177416817760151848Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein9e-25115
NC_009525:2635792:2649656264965626515031848Mycobacterium tuberculosis H37Ra, complete genomePPE family protein8e-25115
NC_015848:2684275:2696301269630126981481848Mycobacterium canettii CIPT 140010059, complete genomePPE family protein8e-25115
NC_016768:1769332:1774055177405517759021848Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein8e-25115
NC_010612:5301135:5316112531611253179771866Mycobacterium marinum M, complete genomePPE family protein7e-1789.4
NC_010612:4501414:4513819451381945157441926Mycobacterium marinum M, complete genomePPE family protein2e-1687.8
NC_010612:5301135:5318444531844453217643321Mycobacterium marinum M, complete genomePPE family protein2e-1378.6
NC_010612:6113155:6127439612743961290521614Mycobacterium marinum M, complete genomePPE family protein2e-1378.2
NC_020133:5710661:5722718572271857243311614Mycobacterium liflandii 128FXT, complete genomePPE family protein2e-1378.2
NC_020133:4911044:4931566493156649342052640Mycobacterium liflandii 128FXT, complete genome6e-1376.3
NC_012943:830000:8493018493018512411941Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein1e-1275.5
NC_016768:830000:8493058493058512451941Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-1275.5
NC_002945:831029:8502938502938522301938Mycobacterium bovis AF2122/97, complete genomePPE family protein1e-1275.5
NC_012207:831030:8502468502468521831938Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein1e-1275.5
NC_017026:829444:848605848605849483879Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein3e-1273.9
NC_017026:829444:8494948494948505491056Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein6e-1066.2
NC_010612:5653031:5659834565983456688549021Mycobacterium marinum M, complete genomePPE family protein2e-0964.3
NC_002945:3429315:3444248344424834454231176Mycobacterium bovis AF2122/97, complete genomePPE family protein2e-0757.8
NC_002755:3465582:3486273348627334874481176Mycobacterium tuberculosis CDC1551, complete genomePPE family protein2e-0757.8
NC_009565:3485772:3503599350359935047741176Mycobacterium tuberculosis F11, complete genomePPE family protein2e-0757.8
NC_000962:3474000:3490476349047634916511176Mycobacterium tuberculosis H37Rv, complete genomePPE FAMILY PROTEIN2e-0757.8
NC_009525:3484924:3502632350263235038071176Mycobacterium tuberculosis H37Ra, complete genomePPE family protein2e-0757.8
NC_017026:3466809:3484534348453434857091176Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein2e-0757.8
NC_016804:3407859:342187834218783422726849Mycobacterium bovis BCG str. Mexico chromosome, complete genomePPE family protein3e-0757.4
NC_008769:3427254:344251334425133443361849Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePPE family protein3e-0757.4
NC_012207:3421144:343516334351633436011849Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein3e-0757.4
NC_013132:4803460:482649248264924827349858Chitinophaga pinensis DSM 2588, complete genomepentapeptide repeat containing protein5e-0756.6