Pre_GI: BLASTP Hits

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Query: NC_016768:1279178:1298789 Mycobacterium tuberculosis KZN 4207 chromosome, complete genome

Start: 1298789, End: 1299940, Length: 1152

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012943:1279228:1298845129884512999961152Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein0764
NC_019950:3139865:3157072315707231583551284Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein0685
NC_015848:3175692:3192818319281831939721155Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein0682
NC_014169:1442435:1455346145534614566441299Bifidobacterium longum subsp. longum JDM301 chromosome, completeintegrase core domain-containing protein1e-97356
NC_016947:666627:6850236850236862761254Mycobacterium intracellulare MOTT-02 chromosome, complete genomeintegrase catalytic subunit5e-51201
NC_015577:2143477:2160815216081521620501236Treponema azotonutricium ZAS-9 chromosome, complete genomeintegrase domain-containing protein7e-49194
NC_015577:2081196:2099318209931821005531236Treponema azotonutricium ZAS-9 chromosome, complete genomeintegrase domain-containing protein7e-49194
NC_016884:2194419:219825121982512199075825Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeintegrase catalytic subunit1e-45184
NC_015757:1329012:135195113519511352775825Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein1e-45184
NC_015499:417896:4178964178964189091014Thermodesulfobium narugense DSM 14796 chromosome, complete genome3e-44179
NC_015578:247266:2805022805022817401239Treponema primitia ZAS-2 chromosome, complete genomeintegrase domain-containing protein7e-42171
NC_015578:247266:2819102819102831601251Treponema primitia ZAS-2 chromosome, complete genomeintegrase domain-containing protein4e-41169
NC_002945:3429315:344737234473723447953582Mycobacterium bovis AF2122/97, complete genomehypothetical protein5e-40165
NC_016804:3407859:342467534246753425256582Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein7e-40165
NC_008769:3427254:344531034453103445891582Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein7e-40165
NC_012207:3421144:343796034379603438541582Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein7e-40165
NC_003047:3360000:3371642337164233731651524Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ISRM181e-39164
NC_003047:3360000:3397707339770733992301524Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ISRM181e-39164
NC_017249:9198000:9200528920052892017601233Bradyrhizobium japonicum USDA 6, complete genometransposase5e-38158
NC_002678:5060670:5093318509331850948201503Mesorhizobium loti MAFF303099, complete genomehypothetical protein8e-29128
NC_016943:3270308:330977433097743310400627Blastococcus saxobsidens DD2, complete genomehypothetical protein8e-27121
NC_016943:3270308:330915933091593309758600Blastococcus saxobsidens DD2, complete genomehypothetical protein1e-1790.9
NC_016804:3407859:342424334242433424593351Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein3e-1480.1
NC_008769:3427254:344487834448783445228351Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein3e-1480.1
NC_012207:3421144:343752834375283437878351Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein3e-1480.1
NC_002945:3429315:344694034469403447290351Mycobacterium bovis AF2122/97, complete genomehypothetical protein3e-1480.1
NC_002945:831029:843927843927844064138Mycobacterium bovis AF2122/97, complete genomehypothetical protein1e-1378.2
NC_008769:860670:873520873520873657138Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-1378.2
NC_012207:831030:843880843880844017138Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-1378.2
NC_002755:831397:843878843878844015138Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-1378.2
NC_009525:830513:843043843043843180138Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-1378.2
NC_016804:831500:843799843799843936138Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-1378.2
NC_017026:829444:842233842233842370138Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-1378.2
NC_017094:1339311:1343254134325413445041251Leptospirillum ferrooxidans C2-3, complete genomeintegrase, catalytic subunit5e-1169.3
NC_017094:1339311:1341028134102813422781251Leptospirillum ferrooxidans C2-3, complete genomeintegrase, catalytic subunit7e-1168.6
NC_014656:1829336:185441718544171854695279Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein2e-0963.5
NC_011761:1412420:141945114194511420206756Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-0860.5
NC_007948:360199:364858364858365442585Polaromonas sp. JS666, complete genome7e-0755.5