Pre_GI: BLASTP Hits

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Query: NC_016582:9050528:9066270 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9066270, End: 9067907, Length: 1638

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008278:5012000:5029673502967350313041632Frankia alni ACN14a, complete genomeputative secreted FAD-linked oxidase6e-104378
NC_016109:8664974:8690628869062886922501623Kitasatospora setae KM-6054, complete genomeputative oxidoreductase2e-103377
NC_016109:62000:9102991029926511623Kitasatospora setae KM-6054, complete genomeputative oxidoreductase2e-103377
NC_014963:2972358:2976471297647129780451575Terriglobus saanensis SP1PR4 chromosome, complete genomeBerberine/berberine domain-containing protein1e-41171
NC_015065:18189:2663926639281081470Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceBerberine/berberine domain protein1e-38161
NC_016631:4384251:4391460439146043930071548Granulicella mallensis MP5ACTX8 chromosome, complete genomeFAD linked oxidase domain-containing protein9e-38158
NC_009074:3791232:3794357379435737960181662Burkholderia pseudomallei 668 chromosome I, complete sequenceFAD/FMN-containing dehydrogenases1e-29131
NC_009076:3876733:3878819387881938804711653Burkholderia pseudomallei 1106a chromosome I, complete sequenceFAD/FMN-containing dehydrogenases4e-29129
NC_007434:111607:1148641148641165251662Burkholderia pseudomallei 1710b chromosome I, complete sequencehexose oxidase5e-29129
NC_006350:3957454:3960414396041439620751662Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative oxidoreductase5e-29129
NC_007651:3656433:3664377366437736660411665Burkholderia thailandensis E264 chromosome I, complete sequenceoxidoreductase, FAD-binding, putative3e-28127
NC_009495:280000:2814312814312827621332Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeFAD-binding protein7e-22105
NC_003888:4523500:4547977454797745495601584Streptomyces coelicolor A3(2), complete genomelipoprotein4e-1377
NC_020272:3396800:3409736340973634110821347Bacillus amyloliquefaciens IT-45, complete genomeFAD-binding protein4e-1170.1
NC_009725:496443:5358995358995372451347Bacillus amyloliquefaciens FZB42, complete genomeYvdP1e-1068.6
NC_020410:495184:5199815199815213271347Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completespore coat protein; putative oxidoreductase1e-1068.2
NC_014551:483773:5007415007415020871347Bacillus amyloliquefaciens DSM 7, complete genomelipoprotein CotQ3e-1067.4
NC_019673:2051363:208323420832342083902669Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-1067
NC_017188:461177:4882134882134895591347Bacillus amyloliquefaciens TA208 chromosome, complete genomelipoprotein CotQ4e-1066.6
NC_017190:466236:4866764866764880221347Bacillus amyloliquefaciens LL3 chromosome, complete genomelipoprotein CotQ4e-1066.6
NC_017191:467207:4942354942354955811347Bacillus amyloliquefaciens XH7 chromosome, complete genomespore coat protein; putative oxidoreductase4e-1066.6
NC_010180:213825:2159572159572172941338Bacillus weihenstephanensis KBAB4 plasmid pBWB401, completeFAD linked oxidase domain protein4e-1066.6
NC_013947:3534209:3539213353921335405591347Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD linked oxidase domain-containing protein4e-0963.2
NC_019842:484933:5279375279375290101074Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-0860.5
NC_013743:1045488:1059392105939210607891398Haloterrigena turkmenica DSM 5511, complete genomeFAD linked oxidase domain protein2e-0654.3